Transcript Information: S_Transcript_254079.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.51386482691887
Replicate 20.26954034505695
Replicate 30
Condition 3: 24 Hour
Replicate 10.26319136735656
Replicate 20
Replicate 30.30388005307369


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_254079.p1 GENE.S_Transcript_254079~~S_Transcript_254079.p1 ORF type:3prime_partial len:83 (+),score=6.76,RVT_1|PF00078.23|2.5e-07 S_Transcript_254079:131-376(+)
ATGGTGACAATGGTTCAGGGGATGTTTTCCTACTGTTGTGTTCTCTGTTATGGTGAATGGTCCCCGAGAGAGTGGTTCTCTTCCTCCTGGGGGTTATGGCAAGGGGATCCCTTGTCCCCTTTTCTGTTTATTTTGGTGGTGGATGTGCTTAGTAGGCTTTTGGATAGGGGATTGGTGGAGGGTTTTGTAGTGGGTAGGGAGGTCGTGCAAGTCTCGCACTTGCTGTTTGCGGACGATACTATTATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_254079.p1 GENE.S_Transcript_254079~~S_Transcript_254079.p1 ORF type:3prime_partial len:83 (+),score=6.76,RVT_1|PF00078.23|2.5e-07 S_Transcript_254079:131-376(+)
MVTMVQGMFSYCCVLCYGEWSPREWFSSSWGLWQGDPLSPFLFILVVDVLSRLLDRGLVEGFVVGREVVQVSHLLFADDTIM

Click here to download the sequence:
Link to NCBI Protein BLAST