Transcript Information: S_Transcript_254080.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.14637092129842
Condition 2: 8 Hour
Replicate 10.16924912950106
Replicate 20.35510870856709
Replicate 30.50752018107098
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_254080.p1 GENE.S_Transcript_254080~~S_Transcript_254080.p1 ORF type:internal len:126 (+),score=24.41,RVT_1|PF00078.23|1.3e-18 S_Transcript_254080:3-377(+)
GTGGTGGATGATGCTCGGCGGTCGGGATTTGAGAGGGTGGTCTTCAAGCTTGAATTTGAGAAGGCCTATGATAGAGTTAGTTGGACCTTCCTTGATCGGGTGCTTCAACGGAAGGGGTTTGAGTTGAAATGGAGACAATGGGTGAGAGGGTGTTTTTCTAATGTTGCTTTCTCAGTGTTGGTGAATGGGGCCCCAAGAGAGTGGTTCTCTTCCTCCTGGGGGTTATGGCAAGGGGATCCCTTGTCCCCTTTTCTGTTTATTTTGGTGGTGGATGTGCTTAGTAGGCTTTTGGATAGGGGATTGGTGGAGGGTTTTGTAGTGGGTAGGGAGGTCGTGCAAGTCTCGCACTTGCTGTTTGCGGACGATACTATTATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_254080.p1 GENE.S_Transcript_254080~~S_Transcript_254080.p1 ORF type:internal len:126 (+),score=24.41,RVT_1|PF00078.23|1.3e-18 S_Transcript_254080:3-377(+)
VVDDARRSGFERVVFKLEFEKAYDRVSWTFLDRVLQRKGFELKWRQWVRGCFSNVAFSVLVNGAPREWFSSSWGLWQGDPLSPFLFILVVDVLSRLLDRGLVEGFVVGREVVQVSHLLFADDTIM

Click here to download the sequence:
Link to NCBI Protein BLAST