Transcript Information: S_Transcript_254418.p1


Annotated TAIR IDAT5G01110.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:42114-44303 | Reverse length=729
E-Value2E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0106203000701
Replicate 20.93091939061244
Replicate 31.3228966811022
Condition 2: 8 Hour
Replicate 11.9795720969491
Replicate 21.4159397873245
Replicate 30.71952228202469
Condition 3: 24 Hour
Replicate 12.2121401003133
Replicate 21.243162660306
Replicate 30.85137702633303


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_254418.p1 GENE.S_Transcript_254418~~S_Transcript_254418.p1 ORF type:5prime_partial len:237 (-),score=38.90,PPR_2|PF13041.2|4.5e-11,PPR_2|PF13041.2|2.7e-15,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|0.0055,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.092,PPR|PF01535.16|0.015,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.0053,PPR|PF01535.16|2,PPR|PF01535.16|0.22,PPR_1|PF12854.3|0.0044,PPR_1|PF12854.3|5.8e-10,PPR_1|PF12854.3|0.079,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|0.45,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|6.4e-06,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|8.4 S_Transcript_254418:418-1128(-)
GATGGGTTCTGCAGGTTAAATAATTTAGCTGAAGCAAATAAGCTATTCCAAGACATGGTTGATATGAATATTGTCCCTAGCAATGTGACCTTTACTATCTTGATTGATCATTACTGCAAAATTGGGATGATGGAAGATGCTGAAGATCTATTCTTGGAGATGCAAAGCAGTAATGTAAAGCCTAGTATCATTACTTATACTTCACTTTTAGATGGACATAATAGAGTAGGTAATGGGTTTAGGATGGTTTCTCTCTTCAATGACCTGTTGGGGAAGGGAATTAAGCCCGATGAAGTAATCTACTCACTAATGGTTGACACTTACTGTAGAGAACGAGATTGGATGAAAGTGTTTCAGATGTTGGATGAGATATCATTCAATGGTTTAACGTTGAAGACAAATGGGTCCGATGCTTTAGTAGATACTTTAGCCCAGACTGAAGACTTTTCAAAAATGTTAATACTCCTTGATGATATGAAAGAGCAGGGTCTCATGCTTAGTTTGAATACTTGCTTCAGTATAGTGCATGCTTTCTGTCGATCCCGACATATGGAGAAGGCAGCTATTATTCTTGGGGCTATGGTCAAGTTTGGGTGGGTTCCAAGCTGCACTAGTGTATCTGCCTTCAATGATGTCCCAAATCAAGAAAACTTTCGACGTGCCCAAAGTATTTTGGATGCAAAGGCATTGAATGTGGCTAATCAGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_254418.p1 GENE.S_Transcript_254418~~S_Transcript_254418.p1 ORF type:5prime_partial len:237 (-),score=38.90,PPR_2|PF13041.2|4.5e-11,PPR_2|PF13041.2|2.7e-15,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|0.0055,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.092,PPR|PF01535.16|0.015,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.0053,PPR|PF01535.16|2,PPR|PF01535.16|0.22,PPR_1|PF12854.3|0.0044,PPR_1|PF12854.3|5.8e-10,PPR_1|PF12854.3|0.079,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|0.45,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|6.4e-06,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|8.4 S_Transcript_254418:418-1128(-)
DGFCRLNNLAEANKLFQDMVDMNIVPSNVTFTILIDHYCKIGMMEDAEDLFLEMQSSNVKPSIITYTSLLDGHNRVGNGFRMVSLFNDLLGKGIKPDEVIYSLMVDTYCRERDWMKVFQMLDEISFNGLTLKTNGSDALVDTLAQTEDFSKMLILLDDMKEQGLMLSLNTCFSIVHAFCRSRHMEKAAIILGAMVKFGWVPSCTSVSAFNDVPNQENFRRAQSILDAKALNVANQV*

Click here to download the sequence:
Link to NCBI Protein BLAST