Transcript Information: S_Transcript_254419.p1


Annotated TAIR IDAT5G01110.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:42114-44303 | Reverse length=729
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29902248578855
Replicate 20.49579302376438
Replicate 30
Condition 2: 8 Hour
Replicate 10.4792222543176
Replicate 20.25136908583962
Replicate 30.23950390567395
Condition 3: 24 Hour
Replicate 10.4908962582156
Replicate 20.50929913654713
Replicate 31.1335750294434


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_254419.p1 GENE.S_Transcript_254419~~S_Transcript_254419.p1 ORF type:internal len:89 (+),score=18.83,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|9.5e-17,PPR_2|PF13041.2|3.1e-11,PPR|PF01535.16|0.11,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|9.5e-10,PPR_1|PF12854.3|39,PPR_1|PF12854.3|2.8e-09,PPR_1|PF12854.3|7.3e-11,PPR_3|PF13812.2|6.6e+02,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|6.9e-07 S_Transcript_254419:3-266(+)
AATATGGAAAAGGCTCTTTGCCTTTTCCAAGAAATGTTGCACAAGGGCATTGCTTCTGTACATACTTTCAACATCTTAATTGATGGGTTCTGCAGTTTAAATAATTTAGCTGAAGCAAATAAGCTATTCCAAGACATGCTTGACATGAATATTTTCCCTAGCACTGTGACCTTTACCATCTTGATTGATCATTACTGCAAAATTGGGATGATGGAGGATGCTGAAGATCTATTCTTGGAGATGCAAAGCAGTAATTTAAAGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_254419.p1 GENE.S_Transcript_254419~~S_Transcript_254419.p1 ORF type:internal len:89 (+),score=18.83,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|9.5e-17,PPR_2|PF13041.2|3.1e-11,PPR|PF01535.16|0.11,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|9.5e-10,PPR_1|PF12854.3|39,PPR_1|PF12854.3|2.8e-09,PPR_1|PF12854.3|7.3e-11,PPR_3|PF13812.2|6.6e+02,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|6.9e-07 S_Transcript_254419:3-266(+)
NMEKALCLFQEMLHKGIASVHTFNILIDGFCSLNNLAEANKLFQDMLDMNIFPSTVTFTILIDHYCKIGMMEDAEDLFLEMQSSNLKP

Click here to download the sequence:
Link to NCBI Protein BLAST