Transcript Information: S_Transcript_254826.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.61627903791941
Replicate 30.41212818063912
Condition 2: 8 Hour
Replicate 10.3574087762648
Replicate 20.74989436781206
Replicate 30.83358063259704
Condition 3: 24 Hour
Replicate 11.0983460972924
Replicate 21.0129077799485
Replicate 30.56362110402494


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_254826.p1 GENE.S_Transcript_254826~~S_Transcript_254826.p1 ORF type:internal len:179 (-),score=48.35,UBN2|PF14223.2|3.8e-37,UBN2_2|PF14227.2|4.3e-15,UBN2_3|PF14244.2|2.3e-05,UBN2_3|PF14244.2|1.2e+03 S_Transcript_254826:1-534(-)
CAGGAGCTTTGGGATTTAGTGGATATTGTGTATGATGAAGCGGATCCGGCACCAGCTCAACCTAATCAGCAATTGCGAGAGGCACACAAAAAGGATGCAAAGGCTCTTCTTTTCATTCAATCGGCAGTGGATGATGAGATATTTCCCCGCATTTCTGCAGCTTCAACCTCAAAGGAAGCATGGGATATCCTGAAACAGGAATACCTGGGTGATAAGAAGGTAATTACTGTTAAGCTCCAATCTCTCCGTCATGATTTTGAAAACTTGAGCATGAATGAAAAGGAATCTATTCAAAGTTTCCTTTCTAGAGTTTCTGGAATTGTTAATCAAAGGAGAACTTATGGTGAGATTGTTGATGATGAAACTGTAGTCAATAAGGTACTGAGGAGTTTACAAAAGGACTTTAATGAAGTGGTAGCTGCAATAGAGATAACTCAGGATTTATCAACTTATTCTTTTGATGAATTAATGAGTGCTTTGATTGCTTATGAGGAGAGATTAAATAGGTCCAGTGAAAAAGTCGATGAGAAGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_254826.p1 GENE.S_Transcript_254826~~S_Transcript_254826.p1 ORF type:internal len:179 (-),score=48.35,UBN2|PF14223.2|3.8e-37,UBN2_2|PF14227.2|4.3e-15,UBN2_3|PF14244.2|2.3e-05,UBN2_3|PF14244.2|1.2e+03 S_Transcript_254826:1-534(-)
QELWDLVDIVYDEADPAPAQPNQQLREAHKKDAKALLFIQSAVDDEIFPRISAASTSKEAWDILKQEYLGDKKVITVKLQSLRHDFENLSMNEKESIQSFLSRVSGIVNQRRTYGEIVDDETVVNKVLRSLQKDFNEVVAAIEITQDLSTYSFDELMSALIAYEERLNRSSEKVDEKA

Click here to download the sequence:
Link to NCBI Protein BLAST