Transcript Information: S_Transcript_254830.p2


Annotated TAIR IDAT1G48720.1
Annotated Gene Nameunknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18018148-18018441 | Forward length=97
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26091177681549
Replicate 20.21630185840701
Replicate 30.18081113807451
Condition 2: 8 Hour
Replicate 10.83628981635816
Replicate 20.21933184940908
Replicate 31.2538733885283
Condition 3: 24 Hour
Replicate 11.070827622088
Replicate 21.7775538491253
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_254830.p2 GENE.S_Transcript_254830~~S_Transcript_254830.p2 ORF type:complete len:102 (-),score=16.32,DUF4219|PF13961.2|1.7e-05,DUF4219|PF13961.2|3.4e+02 S_Transcript_254830:732-1037(-)
ATGTCTAGGAAAATCAATTCATCTCAGCAATTAATCCCAACTTTCGAAGGGGAAAAATATCATTTATGGAGCCTCAAAATGAAAACTCTGTTTAAGTCCCAGGAGCTTTGGGATTTAGTGGAGAATGGGTATGTCGAGCCTGAAGTAGAACCACTGATACCGGGTCAGCAATTGTGGGATGCCCGCAAGAAGGATGCAAAGGCTCTACTCTTCATTCAACTTGATGATGAAAAATTTTCCCCGAATTTCTGCTGCAACTACATCAAAAGGAGCATGGGATATCCTAAAACAGAACTTTCTAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_254830.p2 GENE.S_Transcript_254830~~S_Transcript_254830.p2 ORF type:complete len:102 (-),score=16.32,DUF4219|PF13961.2|1.7e-05,DUF4219|PF13961.2|3.4e+02 S_Transcript_254830:732-1037(-)
MSRKINSSQQLIPTFEGEKYHLWSLKMKTLFKSQELWDLVENGYVEPEVEPLIPGQQLWDARKKDAKALLFIQLDDEKFSPNFCCNYIKRSMGYPKTELSR*

Click here to download the sequence:
Link to NCBI Protein BLAST