Transcript Information: S_Transcript_254919.p1


Annotated TAIR IDAT4G40070.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18576533-18577504 | Forward length=323
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.526795287601
Replicate 215.212243028241
Replicate 317.769028829405
Condition 2: 8 Hour
Replicate 116.84608458842
Replicate 224.006321599707
Replicate 322.386506617104
Condition 3: 24 Hour
Replicate 112.269044152251
Replicate 29.0034319960832
Replicate 310.710731185734


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_254919.p1 GENE.S_Transcript_254919~~S_Transcript_254919.p1 ORF type:complete len:219 (-),score=23.20,zf-RING_2|PF13639.2|5.9e-14,zf-RING_11|PF17123.1|1.5e-09,zf-RING_11|PF17123.1|1.5e+04,zf-rbx1|PF12678.3|4.3e-09,zf-C3HC4_2|PF13923.2|3.9e-07,zf-ANAPC11|PF12861.3|2.1e-06,zf-C3HC4|PF00097.21|1.4e-05 S_Transcript_254919:109-765(-)
ATGCCGAGAATCAATCGCCACGAACCCCAACAACAAAATGTTGTCAACAATTTCCCTCCATCACCCCCCGGTTTCTCAAGATTCCGGCAACACCACCAACACTCACCGGAAACCTCAACAACAACATCATCATCATCAACAACAACAACAGCAACAACAACAAAAGCAAACCCACGATTACTATCCCTTCTCCTACAAGCCCTAATAATGGCCTTCATAATCTCTCTCTTCTTCATCTTCGTAGGCGTAGCTGCCATCATCTTCATCCACCTCTGTATCGCCGGTGGTGCTCTCCACCGCCGCCACCGCCGCCACAATCACAACAACCACCGAAGCCATCACCGACCCATTTCAGAAGACGGTGAATCCTCATCTGGGTATTCCTCAGATGAACTTAATTCCCTCCCTAAATCCTCCTTCCATGGTGAAAACACCAATTGTCCCATTTGTTTGGATAATCTCCTTGATGGTGAAACTTGCCGTGTATTGCCGTCTTGCAAGCATGTGTTCCACTTGGATTGTGTTGATAAGTGGCTCTCTAAAGTCCCTGCTTGCCCTGTTTGTAGAGGTTGTGTTAGATTGGAAAAAAACAAGAACCCCCAAAAAATTGGGGATCATAGGATTGATTGGGAGCATTTGTGGGCTGCTTATGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_254919.p1 GENE.S_Transcript_254919~~S_Transcript_254919.p1 ORF type:complete len:219 (-),score=23.20,zf-RING_2|PF13639.2|5.9e-14,zf-RING_11|PF17123.1|1.5e-09,zf-RING_11|PF17123.1|1.5e+04,zf-rbx1|PF12678.3|4.3e-09,zf-C3HC4_2|PF13923.2|3.9e-07,zf-ANAPC11|PF12861.3|2.1e-06,zf-C3HC4|PF00097.21|1.4e-05 S_Transcript_254919:109-765(-)
MPRINRHEPQQQNVVNNFPPSPPGFSRFRQHHQHSPETSTTTSSSSTTTTATTTKANPRLLSLLLQALIMAFIISLFFIFVGVAAIIFIHLCIAGGALHRRHRRHNHNNHRSHHRPISEDGESSSGYSSDELNSLPKSSFHGENTNCPICLDNLLDGETCRVLPSCKHVFHLDCVDKWLSKVPACPVCRGCVRLEKNKNPQKIGDHRIDWEHLWAAYG*

Click here to download the sequence:
Link to NCBI Protein BLAST