Transcript Information: S_Transcript_25497.p1


Annotated TAIR IDAT1G31870.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303 Blast hits to 9618 proteins in 489 species: Archae - 8; Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942; Viruses - 128; Other Eukaryotes - 2334 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11437269-11439821 | Forward length=561
E-Value1.8E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.241117652524
Replicate 218.017944805304
Replicate 317.827978214147
Condition 2: 8 Hour
Replicate 127.604533021622
Replicate 227.343370559666
Replicate 323.802696492229
Condition 3: 24 Hour
Replicate 120.024476533045
Replicate 219.054389732707
Replicate 320.411172972288


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_25497.p1 GENE.S_Transcript_25497~~S_Transcript_25497.p1 ORF type:complete len:540 (+),score=171.63,Bud13|PF09736.5|5.6e+02,Bud13|PF09736.5|2.2e+03,Bud13|PF09736.5|6.8e-38 S_Transcript_25497:101-1720(+)
ATGATGGTAACAACCACATCAACTTCCACTTCATTGAAAGAATATCTAAAGAAGTATGAAACTAGTACTAGTAATCCAGAAGAGGAGAAAAAAAAGAAGAAAAAGAAGAAAGCCAAACCAGTAGCTTCAGGTGTCCTTGTTGTTGATGAAGATCCCGTTTGGCAAAAGCCCGTCAACCTCGAAGAAGAGGAGGACAATGATTCACCTGATGAGAAACCTTTAGTTGATGAAGACATTGAAGTTAAGAGGATGAAAAGGTTAGAGCAAATTAGGGCTAGGCGTGCTCTTAATGCGATTGCTGAGGATGGAAGTGGTTGGGTTTCAGTTTCTGATGTTCCTGAACGTGCAACTTCTGCTGATCCTAATTCGGATATGTCCCCACCTCGGAAGCGGCCAGCTAGGTTTGACACGCCATCTCCTGAGCCAGGGCTGAACCCTTCTGGTTCAGGTAGAGGAGAAGATACTGATTTGTCACCACCACGGCCAAGTCGTAGACGGAATGATTTTCCTTCACCAGAGCCTTCTAGTTTTCAGAAGGAAGGTTCTGATCTGTCACCACCACGAAATCGTCGTAGGCGCCATGATTCTCCGTCTGAATTGAAGTCTAGGAATGTCGGTGAGGATGGTGATTTGTCAACACCTAGGCCACATCGTAGGCGCTATGATTCTCCCTCGCCAGAACGTGGTGGTAGTGATGGTGATTTATTCCCTCCTCGTCGGCGAGGAAGAAGTTCTGGTTCTCCATCCGTGCCAGAGAAAGGTCCTTCTGTTTCTAGTGTGAAGGACTCTGATATGGATGACCTATCTCCCCCTCGGCGAGGGCGTCCTGATGCTCCAAGATCAAGTGCTTCTCGAGATGCGGAGGATCTTTCACCACCACGGAAAAGCCGAAAGGGTAGTGGTAAAATGAGTGATGAAATTGGTGCACGACAGATGGATAAGGAAGCAGATCTTTCACCCCCTAGAAAGAGGAAGGTACAGCAGAAAACTGGTTTGATTACTGGCAAAGATGTTAGTGAAGAGATTGCTAAAACTAAGAAGGATGAATTGATGAGGTTTCAAGAGATGGACCCGTCTTCAAGTGGACGAGGTGCTGAACCTGTATATCGAATCAAGGGACAACGTGTATCAAAGGAGGAATATTTGAAGTTGACAAAGAAAGAAGAAAAGCCAAAGGAGGAGAAGAAGCTTGAGTGGGGCAAAGGGTTGGCTCAGAAACGTGAGGCTGAAGCAAGGCTTCAGGAGCTCGAACTTGAGAAAGACAAGCCATTTGCACGGTCCAGAGATGATCCTGAGCTGGATCGGATGATGAAGGACAGACTCAGGTGGGGTGATCCAATGGCACATTTGGTGAAGAAAAAGCAATCTGATGTCCTTCCTGACTTGGGTGAGAATGAGAAAATGAAAGAGTCTGGATTCGTCATCCCACAGGAGATACCAAGTCATAGCTGGTTAAAGCGAGGATTAGATTTTGAACCAAACCGATATGGCATCAGGCCTGGAAGACACTGGGATGGGGTTAATCGTAGTAATGGGTATGAAAAACAGTTGTTCAAGAGGATGAGCGAAAAGCGAGCCACTGAGAGAGAAGCTTATCTCTGGTCTGTATCTGACATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_25497.p1 GENE.S_Transcript_25497~~S_Transcript_25497.p1 ORF type:complete len:540 (+),score=171.63,Bud13|PF09736.5|5.6e+02,Bud13|PF09736.5|2.2e+03,Bud13|PF09736.5|6.8e-38 S_Transcript_25497:101-1720(+)
MMVTTTSTSTSLKEYLKKYETSTSNPEEEKKKKKKKKAKPVASGVLVVDEDPVWQKPVNLEEEEDNDSPDEKPLVDEDIEVKRMKRLEQIRARRALNAIAEDGSGWVSVSDVPERATSADPNSDMSPPRKRPARFDTPSPEPGLNPSGSGRGEDTDLSPPRPSRRRNDFPSPEPSSFQKEGSDLSPPRNRRRRHDSPSELKSRNVGEDGDLSTPRPHRRRYDSPSPERGGSDGDLFPPRRRGRSSGSPSVPEKGPSVSSVKDSDMDDLSPPRRGRPDAPRSSASRDAEDLSPPRKSRKGSGKMSDEIGARQMDKEADLSPPRKRKVQQKTGLITGKDVSEEIAKTKKDELMRFQEMDPSSSGRGAEPVYRIKGQRVSKEEYLKLTKKEEKPKEEKKLEWGKGLAQKREAEARLQELELEKDKPFARSRDDPELDRMMKDRLRWGDPMAHLVKKKQSDVLPDLGENEKMKESGFVIPQEIPSHSWLKRGLDFEPNRYGIRPGRHWDGVNRSNGYEKQLFKRMSEKRATEREAYLWSVSDM*

Click here to download the sequence:
Link to NCBI Protein BLAST