Transcript Information: S_Transcript_25538.p1


Annotated TAIR IDAT5G58900.1
Annotated Gene NameHomeodomain-like transcriptional regulator
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23783275-23784667 | Reverse length=288
E-Value2.7E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.801137143422
Replicate 220.224223761055
Replicate 319.700195362028
Condition 2: 8 Hour
Replicate 125.525845985659
Replicate 227.230381425122
Replicate 325.083800464448
Condition 3: 24 Hour
Replicate 116.93530108993
Replicate 217.455713461581
Replicate 314.84024329897


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_25538.p1 GENE.S_Transcript_25538~~S_Transcript_25538.p1 ORF type:complete len:396 (+),score=44.10,Myb_DNA-binding|PF00249.27|5.2e-10 S_Transcript_25538:51-1190(+)
ATGGCTGCCGCCTTAGAAAACCTTCTCTCTCATACTCGCCGCATTCCTCTATCCCACATCTCTTCTTTCTCCCTCATCAACCGCCGTTCCTTCTGTTCCTCAAACCCAAACCCAAACCCAAACCTGATCGCCTCATTCAATTGGGTCGGACCCACCCCTAGAGAGATGACAAGACGGTGCTCCCATTGCAGCCACAATGGGCACAACTCTAGGACCTGCCCAAACAGGGGAGTCAAACTATTTGGGGTCCGATTAACCGACGGATCAATCCGAAAGAGTGCTAGTATGGGCAATCTCAGCCACTACTCTGGTCACCCCCAAAACGGTGCCGTTGGGAGTACTACTCCTGGCTCTCCTGGCGGCGGCGATAACACTCCTGATCACCACCATGGCGGCGGTGCTGACGGTTACGCTTCCGAAGATTTCGTCCCTGGTAGCTCCTCTAGCCGTGAGCGTAAAAAAGGTGTTCCATGGACTGAGGAGGAACACAGGATGTTTTTGCTTGGACTGCAAAAGCTTGGAAAAGGTGATTGGCGAGGAATATCACGTAATTATGTGATCTCAAGGACGCCCACTCAAGTTGCCAGTCATGCTCAGAAATACTTCATTAGGCAAAGCAATGTATCCAGAAGGAAAAGACGGTCCAGCTTATTTGATATTGTAGCAGACGAGTCAGGCGATACACCAATGGTATCACATGATTTCCTCTCCGGGCACCCACCAGAGGCTGAAACTCAAAATAGCAATGAGGTGGAACCTGCTTTACCTAAGCCAGAAACCTCCCAAAGCTGCAATCAAAGTGATACTTCCCAAAATTACTACCCAGTTGTATATCCTACGTACGTTTCTCCATTTTTCCCTTACGCCATTCCATTTTGGTCGGGCTGTAATCCTGAGCCTGCCAAGGAGACACATGAGGTGGTTAAGCCTACAGCAGTTCATACAAAGAATCCTATCAAAGTTGATGAGCTTGTTGGCATGTCAAAACTAAGCTTGGGGGAAACAATTGGCAGTGGAGAACCTTCAAGTTTGTCTCTAAAATTGCTTGAAGGCTCGTCTCGACAATCTGCTTTCCAAGCTAATCCAGCCCCTAGCAGTTCAGGTATGAATTCTAGCGGCAGTCCCATCCATGCCGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_25538.p1 GENE.S_Transcript_25538~~S_Transcript_25538.p1 ORF type:complete len:396 (+),score=44.10,Myb_DNA-binding|PF00249.27|5.2e-10 S_Transcript_25538:51-1190(+)
MAAALENLLSHTRRIPLSHISSFSLINRRSFCSSNPNPNPNLIASFNWVGPTPREMTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYSGHPQNGAVGSTTPGSPGGGDNTPDHHHGGGADGYASEDFVPGSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGISRNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADESGDTPMVSHDFLSGHPPEAETQNSNEVEPALPKPETSQSCNQSDTSQNYYPVVYPTYVSPFFPYAIPFWSGCNPEPAKETHEVVKPTAVHTKNPIKVDELVGMSKLSLGETIGSGEPSSLSLKLLEGSSRQSAFQANPAPSSSGMNSSGSPIHAV*

Click here to download the sequence:
Link to NCBI Protein BLAST