Transcript Information: S_Transcript_255540.p1


Annotated TAIR IDAT1G75820.1
Annotated Gene NameLeucine-rich receptor-like protein kinase family protein
Annotated Gene Symbol(s)CLV1, FAS3, FLO5, ATCLV1
Annotation TypeOrtholog
Chromosome Positionchr1:28463631-28466652 | Reverse length=980
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9839003705541
Replicate 29.1259720442448
Replicate 38.6345537118675
Condition 2: 8 Hour
Replicate 14.0227440825501
Replicate 25.7200749362937
Replicate 34.1905018587066
Condition 3: 24 Hour
Replicate 17.174058328161
Replicate 27.1854584429556
Replicate 36.9647236255036


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_255540.p1 GENE.S_Transcript_255540~~S_Transcript_255540.p1 ORF type:3prime_partial len:880 (+),score=137.69,LRR_8|PF13855.2|1,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|2.9e-08,LRR_8|PF13855.2|0.0023,LRR_8|PF13855.2|6.8e-08,LRR_8|PF13855.2|1.2e-06,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|0.1,LRR_8|PF13855.2|1.7e-05,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|0.00068,LRR_8|PF13855.2|5.2e+02,Pkinase|PF00069.21|3.5e-31,Pkinase_Tyr|PF07714.13|3.6e-28,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.96,LRR_4|PF12799.3|5.1e-05,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.00017,LRR_4|PF12799.3|0.00092,LRR_4|PF12799.3|0.005,LRR_4|PF12799.3|0.18,LRR_4|PF12799.3|4.5,LRR_4|PF12799.3|4.8e+02,LRR_4|PF12799.3|3.9e+02,LRR_4|PF12799.3|0.0026,LRR_4|PF12799.3|6.6e-05,LRR_4|PF12799.3|14,LRR_4|PF12799.3|1.9,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|9.3,LRR_1|PF00560.29|6,LRR_1|PF00560.29|20,LRR_1|PF00560.29|5.4e+02,LRR_1|PF00560.29|0.3,LRR_1|PF00560.29|6.4e+02,LRR_1|PF00560.29|0.16,LRR_1|PF00560.29|4.4e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|12,LRR_1|PF00560.29|79,LRR_1|PF00560.29|3.1e+02,LRR_1|PF00560.29|0.15,LRR_1|PF00560.29|8e+02,LRR_1|PF00560.29|3.2,LRR_1|PF00560.29|3.2e+03 S_Transcript_255540:455-3091(+)
ATGAATTGGTCAACAAAGACCACAACTAATACTAGTCTCCCCTTTCTCCTGAGCATCATCAATTTCTGTTTTTTGATCCTAACAGTTTTTATCAAACATGGAAACTCTGTATCAGATCTTGAAGTTCTTCTCAAATTGAAGGACTCCATGTTAGAGTCTAAGAAGGGGAGAGGATTAGAAGATTGGCTGGTGAATTCAGACCACAGCAATAATGAACAAGCTGCTGTGCACTGCAACTTCTCAGGTGTTGTTTGTGATGACAAATTCAGGGTTGTTTCTCTCAACATCTCCTTTGTTCCGCTCTTTGGAACCCTGTCACCGGAGATTGGGATGCTTGACAAGCTCGAGAATCTCACTCTCGTTGGTGACAATCTCACTGGAAAGATACCGCCAGAGATTTCCAGCCTTACTTCCCTTACACTTTTTAACCTCTCTAACAACAACTTCTCTTACAGCTTCCCTGGTGCTGCTGTTTCCAATTTGTCGAGTTTAGAGTTTATTGATCTTTATAATAACAACTTGAGCGGCCTGCTTCCTACGGAGATTGTGGGGTTGAGCAAGTTGAGGTACTTGAATCTCGGAGGAAACTACTTCTCTGGGGAGATCCCAGAGAAGTATTCCGAGATTGAGAGACTCGAGTTCCTGAGACTGAGTATGAATTCCCTCACAGGAAAGGTTCCCGGGAGCTTAAGCAAGCTCCAGAACCTGAGGGAGCTCTACTTGGGGTACTCTAATGCATACCATGGTGGAATTCCGCCTGAGTTTGGGAAGCTGAGCTCGCTACAGAAACTAGACTTGGCTCAGTGCAGACTCATAGGCGGAATTCCAAAGGAATTGAGCAACCTGAAGAACTTAAACACGCTTTTCCTGCAAGAGAACAACCTCACCGGTGAGATCCCTTCCGAGCTGTCTGAGATGGTGAGCCTCAAGTCGCTAGACTTGTCGTTCAATTCTTTCGTAGGGGAGATTCCGGAGACTTTCTCCAATCTCAAGAATCTTACCCTGTTGGACTTCATGCACAACAATCTCGTTGGTAGGATCCCCCCTTGGATAGGTGATCTTCCACACCTGGAGGTTCTTCAGGTGTGGAATAACAACCTTACCATGGAACTACCAGAGAATCTTGGCAGTAATGGGAGGTTGAAGATCGTCGATGTTGCTTCTAACCACTTGACAGGCACCATTCCTCGAGACCTCTGCAAGAGCGGGTTGTTGCACATGTTGTCTTTGATGGACAATGCTTTATTGGGGCCTATTCCGGAGGAGCTAGGAAGTTGCCACTCCTTGCAGAAGTTCTTGGTCAAACAAAATCAGCTCAACGGCACAATCCCACCTGGTATCTTTAGCTTGCCTAAGGTCCAAGTGATGCAGCTCAACGACAATCTATTCACCGGCACACTCCCTATAGAGATTTCAGGTGAAAGTCTCGGAGAATTCGACATCTCCAACAACATGATCACAGGAAAAATCCCACCCACTATAGGGAATTGGAAAGGCCTTCACAAGCTTTTCCTCCAAAACAACCAGTTATCAGGTGACATCCCACCAGAGATATTCGGGTTGAAACGGTTGCAGACTCTGAACTTGAACTCCAACAGTCTCTCTGGTGAGATTCCAGCCTCTATAGGGGAATGTTCCTCTCTTATTCTTGTTGATTTCAGCAAGAACAACATCAATGGTGAGATTCCAGCCTCGGTGTCAAACCTTGAGGTACTTGGGAGTCTAAATTTGTCACAAAACTCTCTCACTGGCATAATCCCTGCTGATATAGTAAACATCACAAGCCTCCTTATCTTCGACATCTCTGACAATGATTTCTACGGTCCGATTCCTAGCGGTGGCCATTTCTCGGTCTTTAGTCCAGCATGGTTCGGGGGAAACCCGAACCTGTGCTGGCCTCACCGAGCCCAGCCTTGCCCGGTGTACAACCCGAAACAACATCACAGGATATCATTGAGCTCCTCCAAGCTAATCATACTTATCATAGCACTAATCACTCTATTTCTGTTATCAGTTTTGACAGTTATGATCCTACGTAGGAAGCGTTTGAAAGGGTCTAAAGCGTGGAAAGTTGAACGTTTCCAAAGGCTTGAGTTCAAGGCCGAGGATGTGATTGATTGCTTGAAAGAAGAGAACATCATAGGCAAAGGTGGGGCCGGGATCGTCTACCGTGGCACCATGCCAGATGGCACAGACGTGGCGATCAAACGGCTGGCCAACCGTGGTGGGCCTAGCAAGAATGATCATGGGTTTGCAGCCGAGATCGCCACGTTGGGCCAGATCCGACACCGGCATATAGTCCGGTTGTTGGGCTATGTTTCCAATAATGAGACTAACTTACTAGTGTATGAGTTCATGCCTAATGGAAGCTTGGGGGAAAAACTTCATGGGCCAAAAGGGGCCCACTTGCACTGGGAGATAAGGTACAGGATTGCTGTGGAAGCGGCTAAGGGGTTGTGCTACTTGCATCATGATTGTAGCCCAAAGATATTTCATAGAGATGTGAAGAGCAATAACATTTTGTTGGATTCTGATTATGAGGCCCATGTTGCTGATTTTGGGCTTGCTAAGTTTCTTAGGGACACTGGTGCTTCCGAGTGTATGTCCTCCATTGCTGGCTCATATGGTTACATTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_255540.p1 GENE.S_Transcript_255540~~S_Transcript_255540.p1 ORF type:3prime_partial len:880 (+),score=137.69,LRR_8|PF13855.2|1,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|2.9e-08,LRR_8|PF13855.2|0.0023,LRR_8|PF13855.2|6.8e-08,LRR_8|PF13855.2|1.2e-06,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|0.1,LRR_8|PF13855.2|1.7e-05,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|0.00068,LRR_8|PF13855.2|5.2e+02,Pkinase|PF00069.21|3.5e-31,Pkinase_Tyr|PF07714.13|3.6e-28,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.96,LRR_4|PF12799.3|5.1e-05,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.00017,LRR_4|PF12799.3|0.00092,LRR_4|PF12799.3|0.005,LRR_4|PF12799.3|0.18,LRR_4|PF12799.3|4.5,LRR_4|PF12799.3|4.8e+02,LRR_4|PF12799.3|3.9e+02,LRR_4|PF12799.3|0.0026,LRR_4|PF12799.3|6.6e-05,LRR_4|PF12799.3|14,LRR_4|PF12799.3|1.9,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|9.3,LRR_1|PF00560.29|6,LRR_1|PF00560.29|20,LRR_1|PF00560.29|5.4e+02,LRR_1|PF00560.29|0.3,LRR_1|PF00560.29|6.4e+02,LRR_1|PF00560.29|0.16,LRR_1|PF00560.29|4.4e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|12,LRR_1|PF00560.29|79,LRR_1|PF00560.29|3.1e+02,LRR_1|PF00560.29|0.15,LRR_1|PF00560.29|8e+02,LRR_1|PF00560.29|3.2,LRR_1|PF00560.29|3.2e+03 S_Transcript_255540:455-3091(+)
MNWSTKTTTNTSLPFLLSIINFCFLILTVFIKHGNSVSDLEVLLKLKDSMLESKKGRGLEDWLVNSDHSNNEQAAVHCNFSGVVCDDKFRVVSLNISFVPLFGTLSPEIGMLDKLENLTLVGDNLTGKIPPEISSLTSLTLFNLSNNNFSYSFPGAAVSNLSSLEFIDLYNNNLSGLLPTEIVGLSKLRYLNLGGNYFSGEIPEKYSEIERLEFLRLSMNSLTGKVPGSLSKLQNLRELYLGYSNAYHGGIPPEFGKLSSLQKLDLAQCRLIGGIPKELSNLKNLNTLFLQENNLTGEIPSELSEMVSLKSLDLSFNSFVGEIPETFSNLKNLTLLDFMHNNLVGRIPPWIGDLPHLEVLQVWNNNLTMELPENLGSNGRLKIVDVASNHLTGTIPRDLCKSGLLHMLSLMDNALLGPIPEELGSCHSLQKFLVKQNQLNGTIPPGIFSLPKVQVMQLNDNLFTGTLPIEISGESLGEFDISNNMITGKIPPTIGNWKGLHKLFLQNNQLSGDIPPEIFGLKRLQTLNLNSNSLSGEIPASIGECSSLILVDFSKNNINGEIPASVSNLEVLGSLNLSQNSLTGIIPADIVNITSLLIFDISDNDFYGPIPSGGHFSVFSPAWFGGNPNLCWPHRAQPCPVYNPKQHHRISLSSSKLIILIIALITLFLLSVLTVMILRRKRLKGSKAWKVERFQRLEFKAEDVIDCLKEENIIGKGGAGIVYRGTMPDGTDVAIKRLANRGGPSKNDHGFAAEIATLGQIRHRHIVRLLGYVSNNETNLLVYEFMPNGSLGEKLHGPKGAHLHWEIRYRIAVEAAKGLCYLHHDCSPKIFHRDVKSNNILLDSDYEAHVADFGLAKFLRDTGASECMSSIAGSYGYIA

Click here to download the sequence:
Link to NCBI Protein BLAST