Transcript Information: S_Transcript_255640.p1


Annotated TAIR IDAT1G62360.1
Annotated Gene NameKNOX/ELK homeobox transcription factor
Annotated Gene Symbol(s)STM, BUM1, SHL, WAM1, BUM, WAM
Annotation TypeOrtholog
Chromosome Positionchr1:23058796-23061722 | Reverse length=382
E-Value1.4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5922308431305
Replicate 20.56571255275679
Replicate 30.15763022293676
Condition 2: 8 Hour
Replicate 10.91134146654415
Replicate 20
Replicate 33.4615479016636
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.43114605820711


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_255640.p1 GENE.S_Transcript_255640~~S_Transcript_255640.p1 ORF type:3prime_partial len:117 (+),score=31.55,KNOX1|PF03790.9|1.6e+04,KNOX1|PF03790.9|3.2e-15 S_Transcript_255640:820-1167(+)
ATGGAAGGTGGAGGAGAGAATATTAATGGTGGTGGTGGTGGGAATGGAAGTTCATCATCATCATCTTGTTTGATGATGGAGAATGGTTTGTTATACCACCCTACTATGTTTATGATCCCTCCTCACCATCATCCCCATCATCATAATTACCATCATCATGGCATGAGCAACAAACATCATCATCAACAACAACATCAGCAACTTGGTGGTGTTGCTAGTCCCGGATATGATCTTATGAACAACATGAGCAACACCAGCAACAGTAATGGGAGTATTAAGGCGAAAATAATGGCTCATCCTCACTACCCTCGTTTGCTTTCTGCTTATGTTAACTGTCAGAAGGTGGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_255640.p1 GENE.S_Transcript_255640~~S_Transcript_255640.p1 ORF type:3prime_partial len:117 (+),score=31.55,KNOX1|PF03790.9|1.6e+04,KNOX1|PF03790.9|3.2e-15 S_Transcript_255640:820-1167(+)
MEGGGENINGGGGGNGSSSSSSCLMMENGLLYHPTMFMIPPHHHPHHHNYHHHGMSNKHHHQQQHQQLGGVASPGYDLMNNMSNTSNSNGSIKAKIMAHPHYPRLLSAYVNCQKVG

Click here to download the sequence:
Link to NCBI Protein BLAST