Transcript Information: S_Transcript_255678.p1


Annotated TAIR IDAT3G01610.1
Annotated Gene Namecell division cycle 48C
Annotated Gene Symbol(s)CDC48C, emb1354
Annotation TypeOrtholog
Chromosome Positionchr3:231787-235057 | Forward length=820
E-Value1.5E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4888392299402
Replicate 21.0799966916266
Replicate 31.9990378272434
Condition 2: 8 Hour
Replicate 11.0439002253142
Replicate 22.6595903977297
Replicate 32.1613971347708
Condition 3: 24 Hour
Replicate 12.3678020566728
Replicate 21.0301732534703
Replicate 31.4992124296747


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_255678.p1 GENE.S_Transcript_255678~~S_Transcript_255678.p1 ORF type:5prime_partial len:286 (-),score=68.09,AAA|PF00004.25|3.6e-37 S_Transcript_255678:109-966(-)
GAGATTACTCTAGGAGTTCCAGATGAAAACGCAAGGGTTGAGATACTCTCCGTATTGACCCAAAAGCTAAGGCTTGCAGGTGACTTTGATCTGTTAAAACTAGCCAGGGCCACTCCTGGCTTTGTTGGTGCTGACTTGACAGCTTTGGCTAATAAGGCTGGTAATCTTGCGATGAAAAGAATCATTGATCAAAGGAGGCTGGAGCTGTCTAAAGAGGACAGGGAACATGCGGAGGAGTGGTGGAAGGAACCTTGGTCTCCTGAAGAGATGGAAAAGCTAAGCATCACAATGACTGATTTTGAGGAGGCTGCAAAAATGGTGCAACCATCTTCAAGAAGAGAAGGTTTCTCTGCCATTCCTAATGTCAAATGGGAAGATGTTGGGGGGCTCAATCGGCTGCGGGAGGAGTTTGAACGCTTTGTTGTTAGACGTATAAAATATCCTGAACATTATGAGGAATTCGGAGTGGACATGGAAACTGGGTTTTTGCTTTATGGACCCCCTGGTTGTGGCAAGACTCTGATAGCGAAGGCTGTTGCTAACGAAGCTGGAGCCAATTTTATACACATCAAGGGTCCTGAACTTTTAAACAAATATGTTGGTGAAAGTGAATTGCATGTACGGACGATATTCAGTCGTGCAAGGACGTGTGCTCCATGCATACTTTTCTTTGATGAGGTCGATGCTTTGACAACTAAGCGTGGAAAAGAAGGGGGTTGGGTTGTTGAACGGCTTTTGAACCAGCTTTTGATTGAGTTAGATGGTGCTGAGCACAGGCGTGGCATCTACGTGATTGGTGCGACAAATAGTTCTGAGGCCAGGGAGATTCGGGAAACTACTATATGTCCCTCTGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_255678.p1 GENE.S_Transcript_255678~~S_Transcript_255678.p1 ORF type:5prime_partial len:286 (-),score=68.09,AAA|PF00004.25|3.6e-37 S_Transcript_255678:109-966(-)
EITLGVPDENARVEILSVLTQKLRLAGDFDLLKLARATPGFVGADLTALANKAGNLAMKRIIDQRRLELSKEDREHAEEWWKEPWSPEEMEKLSITMTDFEEAAKMVQPSSRREGFSAIPNVKWEDVGGLNRLREEFERFVVRRIKYPEHYEEFGVDMETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELHVRTIFSRARTCAPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGAEHRRGIYVIGATNSSEAREIRETTICPSA*

Click here to download the sequence:
Link to NCBI Protein BLAST