Transcript Information: S_Transcript_25595.p1


Annotated TAIR IDAT5G01720.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:267118-270391 | Reverse length=665
E-Value3.4E-300
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.408640483093
Replicate 29.4788281061915
Replicate 313.55199569995
Condition 2: 8 Hour
Replicate 116.08092395766
Replicate 214.218552691026
Replicate 312.442139194611
Condition 3: 24 Hour
Replicate 18.7379533962377
Replicate 25.808650966975
Replicate 35.7169967318263


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_25595.p1 GENE.S_Transcript_25595~~S_Transcript_25595.p1 ORF type:complete len:675 (+),score=92.27,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|0.082,LRR_4|PF12799.3|0.061,LRR_4|PF12799.3|5,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|28,LRR_4|PF12799.3|0.055,LRR_4|PF12799.3|0.33,LRR_4|PF12799.3|18,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|0.72,LRR_4|PF12799.3|2.4,LRR_8|PF13855.2|0.0054,LRR_8|PF13855.2|8.1e+02,LRR_8|PF13855.2|5.3,LRR_8|PF13855.2|4.6e+03,LRR_8|PF13855.2|5,LRR_8|PF13855.2|33,LRR_8|PF13855.2|1.3e+03,LRR_8|PF13855.2|1.9e+03,LRR_8|PF13855.2|0.086,LRR_8|PF13855.2|3.8e+03 S_Transcript_25595:104-2128(+)
ATGAAGAAACAAAAAACAACAATGAAAGTTCAAACAAATGATCTGTTTGATCTCTTAAGCGAGGAAATCATATTCACAATCCTAGACTACCTGAAGGATTCAAATTCCCAAGACCTGAAATCATTCTCTTTAGTCTGCAAATCCTTCTACAACCTCGAATCAAAACACCGTCGCACGTTGAAGCCCCTACGGTCAGACCACCTCACCAAGACCCTCACACGGTACACCCAAGTTTCCTCCCTCGATCTCACCCTCTGCCCACGTGTCACCGAGGCCACGCTGACGTCACTTGCGGGGCTCTGTGGGTCCAGGCTGGAGAAGCTGGATCTGTCGAGGTCGAAGTTCACGGCGGCAGGGCTGGTGGTGGTTGTGAGCAGGTGTAAGAGGCTGAAGGAGCTGGACTTGTCGAATGCGACGGAACTGAGAGACTCAAGTGCGGCAGCGATTGCGGAGGCGAGGAATTTGGAGAGGTTGTGGTTGGGGAGGTGTAAGTTGGTTACGGATATTGGGATTGGGTGTATTGCGGTTGGGTGTGGCAAGTTGAAGCTGTTGGGGTTGAAATGGTGTTTGGGGATTGGGGATTTGGGGGTTGAGTTGGTTGCCCTCAAGTGTAAGGATCTTCGCTTCTTGGATGTCTCTTATTTGCCGATTACCAGTAAATGTTTGCCAGCCATCTTGAAGTTACAGAATCTTGAGGAGCTGATTCTAGAAGGATGCTTCGGGGTTGATGATGACAGCCTTGTCGATCTCAAGCAGGGTTCTAAGTCCTTGAAGGTACCACTACAGACTCTTGACTTATCAAGCTGCCAGAACGTGAGCCACGTAGGCTTGTCTTCGTTAACAAGTGGGACTGGATATCTACAACAACTAACATTAGCATATGGCTCTCCGGTCACTCTTGATGTCGCCCACAGTTTGCAGAAGTTGTTTAAACTGCAATCTATCAAGTTAGATGGCTGCCAAGTTACTTGTTCTGGTCTCCAAGCCATCGGCAATTGCTGTTTTTCATTGCAGGAGCTGAGCCTGAGTAAATGCTCAGGTGTGACAGACGAAGGCTTGTCCTCTGTTGTGAAGAAGCAAAAGGAGCTCCGAAAGCTGGATATTACATGTTGTCGCAAGATAACTCACGTCTCCATAGCCCATATTGCCAATTCATGCACCTCTCTCACATCTCTGAAGATGGAATCTTGTACTCTGGTTCCTAGGGAAGCCTTTGTTCTGATTGGTCAGAGGTGCCATCTTATTGAGGAACTTGACCTTACTGATAATGAGATAGATGATGAAGGTTTGAAGTCCATCTCCAAATGCTCAAGACTGGCCATTTTGAAACTAGGAATTTGCTTGAACATAACTGCTGAGGGGTTGACGCATATAGGAAAAGGCTGCTCCAAGCTTGTAGAGCTTGACTTGTACAGGTCCATGGAAATTTCAGATATGGGCATTCTAGCCATCGCCCGTGGTTGTCCTGAGCTGGCAATGATTAACATAGCATATTGCAAAGAGATCACAGATGGGTCATTGATATCCTTATCGAAGTGTGCAAGATTAAACACATTAGAATGCCGAGGATGTCCTCTTGTTACATCTTTAGGTATAGCTGCTATTGCTGTTGGATGCAAGCAACTCACCAAGCTAGACATAAAGAAGTGCTACAACATCAACGATTTTGGAGTGATACCACTAGCGCACTTCTCTCAGAATCTTAGACAGATAAATTTGTCCTACACGTCAATTACAGATGTTGGCATGCTCTCCCTGGCCAGTATAAGCTGCCTTCAGAGTATGACTATCTTGCACATGAAAGGTTTGACCCCAAGAGGTCTAGCAGCTTCTCTACTAGCTTGTGGGGGCTTGACAAAAGTGAAGCTTCATTCATCGTTCAAATCGTTGCTACCACAACTGCTCTTTGAACACCTAGAAGCCCGTGGCTGTGTATTCCAGTGGAGAGAGAAAGTATTTCAGGATGACTTGGAAGACTCCAAGTGTTGGAAAATGCAGTTGGAAGAGATGAACAATGATTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_25595.p1 GENE.S_Transcript_25595~~S_Transcript_25595.p1 ORF type:complete len:675 (+),score=92.27,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|0.082,LRR_4|PF12799.3|0.061,LRR_4|PF12799.3|5,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|28,LRR_4|PF12799.3|0.055,LRR_4|PF12799.3|0.33,LRR_4|PF12799.3|18,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|0.72,LRR_4|PF12799.3|2.4,LRR_8|PF13855.2|0.0054,LRR_8|PF13855.2|8.1e+02,LRR_8|PF13855.2|5.3,LRR_8|PF13855.2|4.6e+03,LRR_8|PF13855.2|5,LRR_8|PF13855.2|33,LRR_8|PF13855.2|1.3e+03,LRR_8|PF13855.2|1.9e+03,LRR_8|PF13855.2|0.086,LRR_8|PF13855.2|3.8e+03 S_Transcript_25595:104-2128(+)
MKKQKTTMKVQTNDLFDLLSEEIIFTILDYLKDSNSQDLKSFSLVCKSFYNLESKHRRTLKPLRSDHLTKTLTRYTQVSSLDLTLCPRVTEATLTSLAGLCGSRLEKLDLSRSKFTAAGLVVVVSRCKRLKELDLSNATELRDSSAAAIAEARNLERLWLGRCKLVTDIGIGCIAVGCGKLKLLGLKWCLGIGDLGVELVALKCKDLRFLDVSYLPITSKCLPAILKLQNLEELILEGCFGVDDDSLVDLKQGSKSLKVPLQTLDLSSCQNVSHVGLSSLTSGTGYLQQLTLAYGSPVTLDVAHSLQKLFKLQSIKLDGCQVTCSGLQAIGNCCFSLQELSLSKCSGVTDEGLSSVVKKQKELRKLDITCCRKITHVSIAHIANSCTSLTSLKMESCTLVPREAFVLIGQRCHLIEELDLTDNEIDDEGLKSISKCSRLAILKLGICLNITAEGLTHIGKGCSKLVELDLYRSMEISDMGILAIARGCPELAMINIAYCKEITDGSLISLSKCARLNTLECRGCPLVTSLGIAAIAVGCKQLTKLDIKKCYNINDFGVIPLAHFSQNLRQINLSYTSITDVGMLSLASISCLQSMTILHMKGLTPRGLAASLLACGGLTKVKLHSSFKSLLPQLLFEHLEARGCVFQWREKVFQDDLEDSKCWKMQLEEMNNDS*

Click here to download the sequence:
Link to NCBI Protein BLAST