Transcript Information: S_Transcript_256157.p3


Annotated TAIR IDAT5G08305.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2670134-2671738 | Reverse length=534
E-Value1E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24789651188219
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256157.p3 GENE.S_Transcript_256157~~S_Transcript_256157.p3 ORF type:complete len:89 (+),score=17.61,PPR_2|PF13041.2|0.0058,PPR_2|PF13041.2|4.8e-14,PPR|PF01535.16|0.00052,PPR|PF01535.16|4.2e-09,PPR|PF01535.16|3,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|9.9e-07,PPR_1|PF12854.3|48,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.00071,PPR_3|PF13812.2|65 S_Transcript_256157:417-683(+)
ATGATAGGTTACGCGAAAGTTGGAGATATGGTTTCGGCAAGGAGGCTTTTTGATGAGATGCCGAAGAGGGATGTGATTTCCTGGACGTCAATGATTACAGGGTACTCTCAAGCAGGTAAGTATTCAGATGCTGTAAAACTTTTTCAAGATATGATGATGAACAAGGTTAAACCTGATGAAATTACTGTGGCGAGTGTGCTTTCTGCTTGTGCTCATTTAGGGATGCTTGACATGGGGAAGACAGTTCATGGGGAAGCACAACATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256157.p3 GENE.S_Transcript_256157~~S_Transcript_256157.p3 ORF type:complete len:89 (+),score=17.61,PPR_2|PF13041.2|0.0058,PPR_2|PF13041.2|4.8e-14,PPR|PF01535.16|0.00052,PPR|PF01535.16|4.2e-09,PPR|PF01535.16|3,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|9.9e-07,PPR_1|PF12854.3|48,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|0.00071,PPR_3|PF13812.2|65 S_Transcript_256157:417-683(+)
MIGYAKVGDMVSARRLFDEMPKRDVISWTSMITGYSQAGKYSDAVKLFQDMMMNKVKPDEITVASVLSACAHLGMLDMGKTVHGEAQH*

Click here to download the sequence:
Link to NCBI Protein BLAST