Transcript Information: S_Transcript_256158.p1


Annotated TAIR IDAT3G29230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:11188803-11190605 | Forward length=600
E-Value6E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.40706253796153
Replicate 30.34027188346127
Condition 2: 8 Hour
Replicate 10.47214886310996
Replicate 20.33021178804024
Replicate 30.31462505690009
Condition 3: 24 Hour
Replicate 10.24182527849366
Replicate 20.083630301019732
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256158.p1 GENE.S_Transcript_256158~~S_Transcript_256158.p1 ORF type:complete len:271 (+),score=61.07,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|0.21,PPR|PF01535.16|0.053,PPR|PF01535.16|8.8e+02,PPR|PF01535.16|8.8e+02,PPR|PF01535.16|1.2e+02,PPR_2|PF13041.2|5.7e-07,PPR_2|PF13041.2|8.6e-06,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|0.57,PPR_2|PF13041.2|8.7e+02,PPR_2|PF13041.2|35,PPR_1|PF12854.3|1.5e-07,PPR_1|PF12854.3|0.065,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|0.74,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|2.2e+03,PPR_3|PF13812.2|7.4e-05,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|3.8e+02 S_Transcript_256158:664-1476(+)
ATGGGGAAGCACAACATTAAAGTAGACATCTATGTTGGTAACTCTTTGATTGATATGTACTGTAAATGTGGCAATGTTGAGAAAGCATTACAAGTTTTCCGGAATATGAAAGAGAAGGACTCTGTCTCGTGGACTGCAGTCATATCAGGGCTGGCTGTAAATGGTTTTGCCAGTTCAGCTGTTGAAGTCTGTGAGCAAATGTTAAGTGAAAATGTTAGGCCAACTAATGGAACCTTTGTTGGGATTTTGCTAGCTTGTGCACATGCTGGGTTAATAGATAAGGGATTGGACTATTTTGAAAGCATGCAGAAAGTCTATGGAATTACACCACAAATGAAACATTATGGATGCGTGGTTGATCTCTTGAGCCGTTATGGGAAGTTGGAGAGGGCATATGAATTCATTAAAGAGATGCCACTTGCACCAGATGTTGTATTGTGGAGGATCTTGTTGAGTTCCTGCAAGCTTCACGGAAATCTTGCCTTGGCGCAGATTGTCTCCAGCAATCTTCTTGAATTAGATGGTCATAATAGTGGGAACTATGTCCTTATGCCAGATGTTGTATTGTGGAGGATCTTGTTGAGTTCCTGCAAGCTTCACGGAAATCTTGCCTTGGCGCAGATTGTCTCCAGCAATCTTCTTGAATTAGATGGTCATAATAGTGGGAACTATGTCCTTATGTCAGATACATATGCTGGTGCAGAAAGGTGGGATGCGGCGACAAAGTTCAGAGATTTGATGGAGGAAAATGATGTACAGAAGCCATCTGCTTGGAGCTCTGTAGAAGTAACTGGAAGAAATCAAGGCTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256158.p1 GENE.S_Transcript_256158~~S_Transcript_256158.p1 ORF type:complete len:271 (+),score=61.07,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|0.21,PPR|PF01535.16|0.053,PPR|PF01535.16|8.8e+02,PPR|PF01535.16|8.8e+02,PPR|PF01535.16|1.2e+02,PPR_2|PF13041.2|5.7e-07,PPR_2|PF13041.2|8.6e-06,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|0.57,PPR_2|PF13041.2|8.7e+02,PPR_2|PF13041.2|35,PPR_1|PF12854.3|1.5e-07,PPR_1|PF12854.3|0.065,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|0.74,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|2.2e+03,PPR_3|PF13812.2|7.4e-05,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|3.8e+02 S_Transcript_256158:664-1476(+)
MGKHNIKVDIYVGNSLIDMYCKCGNVEKALQVFRNMKEKDSVSWTAVISGLAVNGFASSAVEVCEQMLSENVRPTNGTFVGILLACAHAGLIDKGLDYFESMQKVYGITPQMKHYGCVVDLLSRYGKLERAYEFIKEMPLAPDVVLWRILLSSCKLHGNLALAQIVSSNLLELDGHNSGNYVLMPDVVLWRILLSSCKLHGNLALAQIVSSNLLELDGHNSGNYVLMSDTYAGAERWDAATKFRDLMEENDVQKPSAWSSVEVTGRNQGS*

Click here to download the sequence:
Link to NCBI Protein BLAST