Transcript Information: S_Transcript_256393.p1


Annotated TAIR IDAT2G47560.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19511934-19512617 | Reverse length=227
E-Value5.3E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60210410034345
Replicate 20.39932650782832
Replicate 30.50070776697558
Condition 2: 8 Hour
Replicate 10.6754648516739
Replicate 20.30369025302796
Replicate 30.38580719647025
Condition 3: 24 Hour
Replicate 10.098845626654272
Replicate 20.61530710162029
Replicate 30.45650759104283


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256393.p1 GENE.S_Transcript_256393~~S_Transcript_256393.p1 ORF type:complete len:221 (+),score=4.28,zf-RING_2|PF13639.2|9.5e+03,zf-RING_2|PF13639.2|2.1e-16,zf-RING_11|PF17123.1|5.8e+03,zf-RING_11|PF17123.1|1e-11,zf-RING_11|PF17123.1|2.5e+03,zf-rbx1|PF12678.3|5.7e-09,zf-C3HC4|PF00097.21|3.2e-08,zf-C3HC4_2|PF13923.2|1.5e+04,zf-C3HC4_2|PF13923.2|1.8e-08,zf-RING_5|PF14634.2|4.8e+03,zf-RING_5|PF14634.2|8e-08,zf-C3HC4_3|PF13920.2|1.5e+04,zf-C3HC4_3|PF13920.2|5.4e-07,zf-ANAPC11|PF12861.3|9e-06 S_Transcript_256393:207-869(+)
ATGGATCCCCATCGACACCAATTCGATAAAGATTCAAACTCAGACTTCACTCAAGGCGGCGGTTACGCCTTGAGTGGCAAAGTAATGATAACCTCCGTCATAACCCTCTTCATAATAGTCCTCTTCATCGTCTGTTTCCACATCTACGCTCGTTGGTTCGTCCGCCGTGCCCACCACCACCATCGCCGCCGTCTCTTCAACCGTGCCGCCGCCACCATTACCACTCGCCTTTCTCTCTCCTCCCACCGTCGTGGGCTCAGCCCCTCTCTCCTCAACTCCATCCCCACCTTCACCTACTCCAAAACCCCCACGTCACCACCTCCCCTCGAGTGCCCCGTTTGCTTGTCCGAATTCGAAGACGGTGAAACGGGTCGGGTCTTGCCCAAGTGCGGTCACACCTTCCATGTTGAGTGCATTGACACGTGGTTCAAGTCCCGGTCTAGCTGCCCCGTCTGTCGTGCCCCCGTTCGGGTCGAGCCAGGACAGGTGAACCGGGTTAGGATGAGTGAACCGGGTTCGTCAGAGATGCGGTTGCCGCCACCGGTTGAGTGTCGACCAAAGGCGGTGGAGTTGGAGGGAATTGTGGTGGAGTGTAGGAATAATGATGGGTCGAACTCAAGGGTTGATGAGGGTTTGTCGTTAAAGAGGTTTGGTATTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256393.p1 GENE.S_Transcript_256393~~S_Transcript_256393.p1 ORF type:complete len:221 (+),score=4.28,zf-RING_2|PF13639.2|9.5e+03,zf-RING_2|PF13639.2|2.1e-16,zf-RING_11|PF17123.1|5.8e+03,zf-RING_11|PF17123.1|1e-11,zf-RING_11|PF17123.1|2.5e+03,zf-rbx1|PF12678.3|5.7e-09,zf-C3HC4|PF00097.21|3.2e-08,zf-C3HC4_2|PF13923.2|1.5e+04,zf-C3HC4_2|PF13923.2|1.8e-08,zf-RING_5|PF14634.2|4.8e+03,zf-RING_5|PF14634.2|8e-08,zf-C3HC4_3|PF13920.2|1.5e+04,zf-C3HC4_3|PF13920.2|5.4e-07,zf-ANAPC11|PF12861.3|9e-06 S_Transcript_256393:207-869(+)
MDPHRHQFDKDSNSDFTQGGGYALSGKVMITSVITLFIIVLFIVCFHIYARWFVRRAHHHHRRRLFNRAAATITTRLSLSSHRRGLSPSLLNSIPTFTYSKTPTSPPPLECPVCLSEFEDGETGRVLPKCGHTFHVECIDTWFKSRSSCPVCRAPVRVEPGQVNRVRMSEPGSSEMRLPPPVECRPKAVELEGIVVECRNNDGSNSRVDEGLSLKRFGIV*

Click here to download the sequence:
Link to NCBI Protein BLAST