Transcript Information: S_Transcript_256394.p1


Annotated TAIR IDAT5G57750.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23399668-23400300 | Forward length=210
E-Value5.8E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14622528151198
Replicate 20.48489647379153
Replicate 30.20266742949012
Condition 2: 8 Hour
Replicate 10.11717247426996
Replicate 20
Replicate 30.11712004178561
Condition 3: 24 Hour
Replicate 10.1200268323659
Replicate 20
Replicate 30.13858266156657


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256394.p1 GENE.S_Transcript_256394~~S_Transcript_256394.p1 ORF type:complete len:182 (+),score=-0.70,zf-RING_2|PF13639.2|3.2e+03,zf-RING_2|PF13639.2|1.1e-16,zf-RING_11|PF17123.1|2.8e+03,zf-RING_11|PF17123.1|7.4e-12,zf-rbx1|PF12678.3|1.3e+04,zf-rbx1|PF12678.3|1.5e-09,zf-C3HC4|PF00097.21|7.3e+03,zf-C3HC4|PF00097.21|1.2e-08,zf-C3HC4_2|PF13923.2|8.4e+03,zf-C3HC4_2|PF13923.2|1.9e-08,zf-RING_5|PF14634.2|3.8e+03,zf-RING_5|PF14634.2|1.3e-07,zf-C3HC4_3|PF13920.2|1e+04,zf-C3HC4_3|PF13920.2|5.9e-07,zf-ANAPC11|PF12861.3|1e+04,zf-ANAPC11|PF12861.3|4e-06 S_Transcript_256394:186-731(+)
ATGCTAACCTCTGTCATAACTCTCTTTATAATAGTCCTATTGATCGTCTGTTTCCACGTCTACGCTCGTTGGTTCGTCCGCCGTGCCCACCACCACCATCGCCGCCGTCTCTTCAACCGTGCCGCCGCCACCATCACGTCTCGCCTTTCTCTCTCCTCTGACCGTGGTGGGGTCAGTCCCTCTCTCCTCAACTCCATCCCCACCTTCACTTACTCCAAAACCCCTGCATCCGCCGCCACTTCATCACCTCCCCTCGAGTGCCCCGTCTGCTTGTCCGAATTCGAAGACGGTGAAACGGGTCGGGTCTTGCCCAAGTGCGGTCACACCTTCCATGTTGAGTGCATTGACACGTGGTTCAAGTCCCGGTCTAGCTGCCCCCTCTGTCGTGCCCCGGTTCGGATCGAGCCGGGACATGTGAACCGGATTAGGATTAGTGAACCGGGTTCTTCAGAGATGCGGTTGCCAGCACCGATTGAGTGTCGACCAAAGGCGGTGGAGTTGGAGGGAATTGTGGTGGAGTGTAGGAATAATGATGGGTCGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256394.p1 GENE.S_Transcript_256394~~S_Transcript_256394.p1 ORF type:complete len:182 (+),score=-0.70,zf-RING_2|PF13639.2|3.2e+03,zf-RING_2|PF13639.2|1.1e-16,zf-RING_11|PF17123.1|2.8e+03,zf-RING_11|PF17123.1|7.4e-12,zf-rbx1|PF12678.3|1.3e+04,zf-rbx1|PF12678.3|1.5e-09,zf-C3HC4|PF00097.21|7.3e+03,zf-C3HC4|PF00097.21|1.2e-08,zf-C3HC4_2|PF13923.2|8.4e+03,zf-C3HC4_2|PF13923.2|1.9e-08,zf-RING_5|PF14634.2|3.8e+03,zf-RING_5|PF14634.2|1.3e-07,zf-C3HC4_3|PF13920.2|1e+04,zf-C3HC4_3|PF13920.2|5.9e-07,zf-ANAPC11|PF12861.3|1e+04,zf-ANAPC11|PF12861.3|4e-06 S_Transcript_256394:186-731(+)
MLTSVITLFIIVLLIVCFHVYARWFVRRAHHHHRRRLFNRAAATITSRLSLSSDRGGVSPSLLNSIPTFTYSKTPASAATSSPPLECPVCLSEFEDGETGRVLPKCGHTFHVECIDTWFKSRSSCPLCRAPVRIEPGHVNRIRISEPGSSEMRLPAPIECRPKAVELEGIVVECRNNDGSN*

Click here to download the sequence:
Link to NCBI Protein BLAST