Transcript Information: S_Transcript_256395.p1


Annotated TAIR IDAT3G62690.1
Annotated Gene NameAtL5
Annotated Gene Symbol(s)ATL5
Annotation TypeOrtholog
Chromosome Positionchr3:23185829-23186602 | Reverse length=257
E-Value1.2E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32720903158009
Replicate 20.18084253735668
Replicate 30.15116996789837
Condition 2: 8 Hour
Replicate 10.34959656257595
Replicate 20.18337580852235
Replicate 30.26208009350387
Condition 3: 24 Hour
Replicate 10
Replicate 20.27865342102066
Replicate 30.51684517223599


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256395.p1 GENE.S_Transcript_256395~~S_Transcript_256395.p1 ORF type:complete len:244 (+),score=7.97,zf-RING_2|PF13639.2|4e+03,zf-RING_2|PF13639.2|1.8e-16,zf-RING_11|PF17123.1|4.4e+03,zf-RING_11|PF17123.1|1.1e-11,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|2.2e-09,zf-C3HC4|PF00097.21|1.5e+04,zf-C3HC4|PF00097.21|1.9e-08,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|3.1e-08,zf-RING_5|PF14634.2|5.9e+03,zf-RING_5|PF14634.2|2.1e-07,zf-C3HC4_3|PF13920.2|9.8e-07,zf-ANAPC11|PF12861.3|8e-06 S_Transcript_256395:97-828(+)
ATGGATCCCCATCGACAAGAATTCGATAAAGACTCAAACTCAGACTCGGACTTCACTCAAGGTGGCCGTTACGCCTTGAGTGGCAAAGTAATGCTAACCTCTGTCATAACTCTCTTTATAATAGTCCTATTGATCGTCTGTTTCCACGTCTACGCTCGTTGGTTCGTCCGCCGTGCCCACCACCACCATCGCCGCCGTCTCTTCAACCGTGCCGCCGCCACTATCACCACTCGCCTTTCTCTCTCCTCCCACCGTCGTGGGCTCAGCCCCTCTCTCCTCAACTCCATCCCCACCTTCACCTACTCCAAAACCCCTGCCTCCGCCGCCGCTTCATCACCTCCCCTCGAGTGCCCCGTCTGCTTGTCCGAATTCGAAGACGGTGAAACGGGTCGGGTCTTGCCCAAGTGCGGTCACACCTTCCATGTTGAGTGCATTGACACGTGGTTCAAGTCCCGGTCTAGCTGCCCCCTCTGTCGTGCCCCGGTTCGGATCGAGCCGGGACATGTGAACCGGATTAGGATTAGTGAACCGGGTTCTTCAGAGATGCGGTTGCCACCACCGGTTGAGTGTCGACCAAAGGCGGTGGAGTTGGAGGGACATGTGAACCGGATTAGGATTAGTGAACCGGGTTCTTCAGAGATGCGGTTGCCACCACCGGTTGAGTGTCGACCAAAGGCGGTGGAGTTGGAGGGAATTGTGGTGGAGTGTAGGAATAATGATGGGTCGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256395.p1 GENE.S_Transcript_256395~~S_Transcript_256395.p1 ORF type:complete len:244 (+),score=7.97,zf-RING_2|PF13639.2|4e+03,zf-RING_2|PF13639.2|1.8e-16,zf-RING_11|PF17123.1|4.4e+03,zf-RING_11|PF17123.1|1.1e-11,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|2.2e-09,zf-C3HC4|PF00097.21|1.5e+04,zf-C3HC4|PF00097.21|1.9e-08,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|3.1e-08,zf-RING_5|PF14634.2|5.9e+03,zf-RING_5|PF14634.2|2.1e-07,zf-C3HC4_3|PF13920.2|9.8e-07,zf-ANAPC11|PF12861.3|8e-06 S_Transcript_256395:97-828(+)
MDPHRQEFDKDSNSDSDFTQGGRYALSGKVMLTSVITLFIIVLLIVCFHVYARWFVRRAHHHHRRRLFNRAAATITTRLSLSSHRRGLSPSLLNSIPTFTYSKTPASAAASSPPLECPVCLSEFEDGETGRVLPKCGHTFHVECIDTWFKSRSSCPLCRAPVRIEPGHVNRIRISEPGSSEMRLPPPVECRPKAVELEGHVNRIRISEPGSSEMRLPPPVECRPKAVELEGIVVECRNNDGSN*

Click here to download the sequence:
Link to NCBI Protein BLAST