Transcript Information: S_Transcript_256704.p3


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36290456229792
Replicate 20.60171244247768
Replicate 30
Condition 2: 8 Hour
Replicate 10.19386718470121
Replicate 20
Replicate 30.48445108193139
Condition 3: 24 Hour
Replicate 10.69506447470072
Replicate 20.6181039520822
Replicate 30.68787393832135


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256704.p3 GENE.S_Transcript_256704~~S_Transcript_256704.p3 ORF type:5prime_partial len:220 (+),score=40.40,UBN2|PF14223.2|3e+03,UBN2|PF14223.2|1.1e-25,UBN2_2|PF14227.2|4.3e-10,DUF4219|PF13961.2|4.1e-09 S_Transcript_256704:1-660(+)
CGGAAACGCTATGGTGAGGGATGGGATTGTGAAGATCTTGAATGTAGATGGCTTGCAGTGCAGTCAAGAGTTTTCGCCGGTCAAGGAACTGTTGTAGCAAACCCACCTCGAAAAGAACCCCAACTTCCAATTTTTGATGGAGAGCATTATGATTATTGGAGTAGTCAAATGCAGACCTTTTTTATATCACAAGACTTATGGGAATTGGTTGAAAATGGATATGAAGATTTACCAGAAAAGGCAGATGAGGCACAACAAAAATCATACAAGGAAAATAAAAGAAGGGATGCCCTTGCATTGCGATATATACATGCAGGGGTGAGCAAACTCATCTTTCCTCGATTATTTGGCATCGACAAGGCCAAAGAAGCATGTGATATACTAAAAAAGGAGTTTCTAGGCAATGAAAAAGTTATTGCCGTCAAGTTGCAAAACTTATGGAAAGATTTTGATAACTTGGAAATGAAAAAATCTGAAAGCATTCGAGATTATTTCTCTCATGTTGCAGAGATTGTGAATCAAATTAGAAGTCTTGGTGATACAATTGAAGACAAGAAGGTCATGGAGAAACTATTAAGATCTTTGACATCAACTTATAATTCGCTGCATTTATCATTGAAGAGTCAAAAGATCTCTCATCACTCAGCATGTATGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256704.p3 GENE.S_Transcript_256704~~S_Transcript_256704.p3 ORF type:5prime_partial len:220 (+),score=40.40,UBN2|PF14223.2|3e+03,UBN2|PF14223.2|1.1e-25,UBN2_2|PF14227.2|4.3e-10,DUF4219|PF13961.2|4.1e-09 S_Transcript_256704:1-660(+)
RKRYGEGWDCEDLECRWLAVQSRVFAGQGTVVANPPRKEPQLPIFDGEHYDYWSSQMQTFFISQDLWELVENGYEDLPEKADEAQQKSYKENKRRDALALRYIHAGVSKLIFPRLFGIDKAKEACDILKKEFLGNEKVIAVKLQNLWKDFDNLEMKKSESIRDYFSHVAEIVNQIRSLGDTIEDKKVMEKLLRSLTSTYNSLHLSLKSQKISHHSACMS*

Click here to download the sequence:
Link to NCBI Protein BLAST