Transcript Information: S_Transcript_256706.p3


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.33942753165407
Replicate 30.85120320385849
Condition 2: 8 Hour
Replicate 11.2029707358383
Replicate 20.80309200245172
Replicate 31.202432428999
Condition 3: 24 Hour
Replicate 10.67215026124905
Replicate 20.464898699002
Replicate 30.25868763492427


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256706.p3 GENE.S_Transcript_256706~~S_Transcript_256706.p3 ORF type:complete len:195 (+),score=34.32,UBN2|PF14223.2|2.5e+03,UBN2|PF14223.2|8.2e-26,UBN2_2|PF14227.2|3.2e-10,DUF4219|PF13961.2|3.5e-09 S_Transcript_256706:478-1062(+)
ATGGCTACCAACAATTCAACTTCCTTATTTTCATACACAGAACCCCAACTTCCAATTTTTGATGGAGAGCATTATGATTATTGGAGTAGTCAAATGCAGACCTTTTTTATATCACAAGACTTATGGGAATTGGTTGAAAATGGATATGAAGATTTACCAGAAAAGGCAGATGAGGCACAACAAAAATCATACAAGGAAAATAAAAGAAGGGATGCCCTTGCATTGCGATATATACATGCAGGGGTGAGCAAACTCATCTTTCCTCGATTATTTGGCATCGACAAGGCCAAAGAAGCATGTGATATACTAAAAAAGGAGTTTCTAGGCAATGAAAAAGTTATTGCCGTCAAGTTGCAAAACTTATGGAAAGATTTTGATAACTTGGAAATGAAAAAATCTGAAAGCATTCGAGATTATTTCTCTCATGTTGCAGAGATTGTGAATCAAATTAGAAGTCTTGGTGATACAATTGAAGACAAGAAGGTCATGGAGAAACTATTAAGATCTTTGACATCAACTTATAATTCGCTGCATTTATCATTGAAGAGTCAAAAGATCTCTCATCACTCAGCATGTATGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256706.p3 GENE.S_Transcript_256706~~S_Transcript_256706.p3 ORF type:complete len:195 (+),score=34.32,UBN2|PF14223.2|2.5e+03,UBN2|PF14223.2|8.2e-26,UBN2_2|PF14227.2|3.2e-10,DUF4219|PF13961.2|3.5e-09 S_Transcript_256706:478-1062(+)
MATNNSTSLFSYTEPQLPIFDGEHYDYWSSQMQTFFISQDLWELVENGYEDLPEKADEAQQKSYKENKRRDALALRYIHAGVSKLIFPRLFGIDKAKEACDILKKEFLGNEKVIAVKLQNLWKDFDNLEMKKSESIRDYFSHVAEIVNQIRSLGDTIEDKKVMEKLLRSLTSTYNSLHLSLKSQKISHHSACMS*

Click here to download the sequence:
Link to NCBI Protein BLAST