Transcript Information: S_Transcript_256707.p2


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0589656592161
Replicate 22.0287622581623
Replicate 34.8756658611818
Condition 2: 8 Hour
Replicate 16.8633440101118
Replicate 24.6286583392538
Replicate 36.1252435646498
Condition 3: 24 Hour
Replicate 12.2598155335097
Replicate 23.9075537200599
Replicate 34.6385369020903


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256707.p2 GENE.S_Transcript_256707~~S_Transcript_256707.p2 ORF type:5prime_partial len:87 (+),score=25.04,RVT_2|PF07727.10|1.4e-07 S_Transcript_256707:1-261(+)
AAAAAGAAAAGAAATAAGGAAATAAGAAGTATGAAATTGTTGCATTTGGACTTGGATTATGGGCTAATTGAGGAAATCAACCCACTTTCAATTGGAGCTTTGAAGGAAAATGTATGGCTTAAGGCCATGGATGATGAAATCACCATGATCCAGAAAAATAAAACATGGGAGCTTGTGCATCTTCCGGAAGGGAAGGATGTGATTGGTTTGAAATGGGTCTACAAGACAAAGTTGAAAGAAGATGGAAGCATACAAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256707.p2 GENE.S_Transcript_256707~~S_Transcript_256707.p2 ORF type:5prime_partial len:87 (+),score=25.04,RVT_2|PF07727.10|1.4e-07 S_Transcript_256707:1-261(+)
KKKRNKEIRSMKLLHLDLDYGLIEEINPLSIGALKENVWLKAMDDEITMIQKNKTWELVHLPEGKDVIGLKWVYKTKLKEDGSIQK*

Click here to download the sequence:
Link to NCBI Protein BLAST