Transcript Information: S_Transcript_256912.p1


Annotated TAIR IDAT5G59050.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23839494-23842519 | Reverse length=312
E-Value4.7E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2333552902556
Replicate 22.2681372442305
Replicate 30.1723620194729
Condition 2: 8 Hour
Replicate 10.5979081397327
Replicate 21.0454134878377
Replicate 31.7929217611667
Condition 3: 24 Hour
Replicate 10.40831557926344
Replicate 20.6354339694303
Replicate 30.70716012350793


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256912.p1 GENE.S_Transcript_256912~~S_Transcript_256912.p1 ORF type:internal len:107 (+),score=10.45 S_Transcript_256912:3-320(+)
GGACATCCTCAACAACAGCCACCTCATCACAACCCCCGTCAACAGACAACTGGTGGGCCCGGGATGAGGGCCATGTTCCTCAACGGTTCGGGGCCGGGTTCGGGGCCCGTGAAGAGGCAGTCTACGGGTACTGGCGTGTTTTTGCCCCGGAGAATTGGGACTCAGTCTCAGCCTGAGCCTCGCAAAAAGCCAACAGGATGTTCAACTGTGTTGCTTCCAGCAAGGGTGGTTCAGGCTCTCAGTCTGGATCTTGACGAGATGAACAATAGCGCTAATTTTAACTCCCCCCACCCACGATTTGGCTCCGGTTTTGCCTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256912.p1 GENE.S_Transcript_256912~~S_Transcript_256912.p1 ORF type:internal len:107 (+),score=10.45 S_Transcript_256912:3-320(+)
GHPQQQPPHHNPRQQTTGGPGMRAMFLNGSGPGSGPVKRQSTGTGVFLPRRIGTQSQPEPRKKPTGCSTVLLPARVVQALSLDLDEMNNSANFNSPHPRFGSGFAS

Click here to download the sequence:
Link to NCBI Protein BLAST