Transcript Information: S_Transcript_256971.p2


Annotated TAIR IDAT5G10400.1
Annotated Gene NameHistone superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3270478-3270888 | Reverse length=136
E-Value6.1E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0863021040421
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.25237148304299
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.44772859890739


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_256971.p2 GENE.S_Transcript_256971~~S_Transcript_256971.p2 ORF type:5prime_partial len:169 (+),score=6.68,Histone|PF00125.20|2.4e-52,CENP-S|PF15630.2|1.3e-05 S_Transcript_256971:2-508(+)
CCACTCACACCCATCGCTTCCAACCAACAACCACCTCAACTCATCTACAATATCTCAACTACAGACCCATCAACCTCATCACCACACAACATCGCAATGGCCCGTACCAAGCAGACCGCCCGTAAGTCCACGGGTGGCAAGGCTCCTCGCAAGCAGCTCGCCTCCAAGGCCGCCCGCAAGAGCGCCCCCTCTACCGGAGGTGTCAAGAAGCCTCACCGCTACAAGCCCGGTACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCCACTGAGCTTCTGATCCGCAAGCTCCCCTTCCAGCGTCTCGTTCGTGAGATCGCCCAGGACTTCAAGTCCGACCTCCGCTTCCAGTCTTCCGCCATCGGCGCTCTCCAGGAGTCCGTCGAGGCTTACCTCGTCTCCCTCTTCGAGGACACTAACCTCTGCGCCATCCACGCCAAGCGTGTCACCATCCAGTCCAAGGACATCCAGCTTGCCCGCCGCCTCCGTGGCGAGCGCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_256971.p2 GENE.S_Transcript_256971~~S_Transcript_256971.p2 ORF type:5prime_partial len:169 (+),score=6.68,Histone|PF00125.20|2.4e-52,CENP-S|PF15630.2|1.3e-05 S_Transcript_256971:2-508(+)
PLTPIASNQQPPQLIYNISTTDPSTSSPHNIAMARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERN*

Click here to download the sequence:
Link to NCBI Protein BLAST