Transcript Information: S_Transcript_257500.p1


Annotated TAIR IDAT2G33680.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14249608-14251791 | Forward length=727
E-Value3.1E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60142375672724
Replicate 20.37394558572059
Replicate 30.52098124529945
Condition 2: 8 Hour
Replicate 11.6465932259933
Replicate 22.2329717098032
Replicate 31.966999119857
Condition 3: 24 Hour
Replicate 10.37025226255244
Replicate 20.59753928826528
Replicate 30.47499142005868


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_257500.p1 GENE.S_Transcript_257500~~S_Transcript_257500.p1 ORF type:complete len:531 (+),score=126.02,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|10,PPR_2|PF13041.2|2.7e-09,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|3.1e-12,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|2.2e-13,PPR_2|PF13041.2|0.99,PPR_2|PF13041.2|64,PPR_2|PF13041.2|32,PPR|PF01535.16|0.00086,PPR|PF01535.16|1.4,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|12,PPR|PF01535.16|9.3e-08,PPR|PF01535.16|0.062,PPR|PF01535.16|3.1e-09,PPR|PF01535.16|0.25,PPR|PF01535.16|0.18,PPR|PF01535.16|6.8e+03,PPR|PF01535.16|6.7,PPR_3|PF13812.2|30,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|3e-05,PPR_3|PF13812.2|77,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|2.6e+02,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|2.3e+02,TPR_14|PF13428.2|2.2e+02,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|26,TPR_14|PF13428.2|16,TPR_14|PF13428.2|23,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|3e+03,TPR_19|PF14559.2|6.6e+02,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|13,TPR_19|PF14559.2|0.11,DYW_deaminase|PF14432.2|1.6e-05 S_Transcript_257500:147-1739(+)
ATGCCTGAGAGAAATTCGGTGTCATGGGCGACGATGATTTCTGGGTATGGATCATGTGGAATCGCTGAAGAAGCCGTGGGGTTGTTTAAGTTGATTATGCGGGGAGAAGAAGAAAGAGGGAACCAGTTTTTCTTGACTAGTGTGCTTAGTGCTTTGACTGTTCCTGAATTGGTTGGTGTTGGAAGGGAAGTTCATTGCTTTGCTGTTAAAGCTGGGGTGGTATGGATTGGGGAAGTTAGAAATGCCCTTGTTACTATGTACTTGAAATGTGGGTCCCCGAGTGATGCCCTTCGGTTGTTTGTGATGTCTACTGATAAGAATCCTATCATGTGGTCTGCAATGGTCACTGGCTTGGCGCAGAGTGGGCACTCGGAGAGAGCTTTGGAGTTGTTCTCTGAAATGCATTATTCTGGGGTTAGGCCTAGCGAGTATACATTTGTTGGTGTCGTTAATGCTTGTAGTGACATTGGTGCCTTGAAGGAAGGGAAACAAGTTCATTGTTATTCCATCAAAATGGGATTTGAGCATCAGATGTATATAATAACTGCATTGGTCGATATGTATGCCAAATGTGGTAGCATTACTGATGCAAGGAAAGGGTTTGATCACTTACAGGAACCTGATGTTGTTTTGTGGACCTCGATGATAGGGGGTTATGTTCAAAATGGAGAGAATGAAGAAGCTTTGAGTTTGTATGCCAGAATGGAGGCAAAGGGGATTTCACCCAACAGCCTAACCATTGCTAATGTCTTGAAAGGCTGTTCAAGTCTTGCTGCTTTGGAGCAAGGAAAACAAATCCATGCCCATGTTGTTATATATGGAATTGGTCTTGAGATTGCAATTGGAAGTGCTCTTTCAAAGATGTATGCAAAGTGTGGTTGTATTGATGAGGGCAATATGGTTTTTGAGAGGATGCCTGAAAGGGATGTGGTTTCGTGGAATGCTATGATATCTGGCCTTGCTCAAAATGGATGCAGTGAAAAAGCTCTTGTGCTTTTTGACAAGATGACATCAGAGGGTGTAAAGCCTGATAGTGTCAGCTTTGTGAACATTCTCTCTGCTTGTAGCCACATTGGATTGGTGGAAAGAGCATGGGGTTACTTCAAGATGATGTACACTGAATTTGGCATTGTACCAGGATTAGAGCATTATGCATGCATGGTTGATGTGTACAGCCGGGCAGGGAGGCTAACTGAAGCCAAGGAATTTATAGAATCAGCCACTTTAGAACATGGAATGTGTTTATGGAGAATCCTCTTAAGTGCATGTCGAAATCATCGTCATTATGAACTTGGAGCTTATGCAGGAGAAAAACTAATGGAGCTAGGCTCTCAAGAATCATCAGCTTATGTGCTATTATCAAGAATTTACATTGCACTGGGTAAATCAGATGATGCAGAGCGAGTCATGAGGTTGATGAAGCTTAGAAGAGTAGATAAGGAGCTCGGGTGTAGCTGGATCGAGTTCAAGAACCTTGTACATGTGTTTGCTGTTGGGGATCAGAGGCATCCTGAGATAGGGGATATACGTAGTTGGTTAAGAATCCTGACCAAACAAATGATGGATGAAGGTTATCAACCTGCTTATGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_257500.p1 GENE.S_Transcript_257500~~S_Transcript_257500.p1 ORF type:complete len:531 (+),score=126.02,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|10,PPR_2|PF13041.2|2.7e-09,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|3.1e-12,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|2.2e-13,PPR_2|PF13041.2|0.99,PPR_2|PF13041.2|64,PPR_2|PF13041.2|32,PPR|PF01535.16|0.00086,PPR|PF01535.16|1.4,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|12,PPR|PF01535.16|9.3e-08,PPR|PF01535.16|0.062,PPR|PF01535.16|3.1e-09,PPR|PF01535.16|0.25,PPR|PF01535.16|0.18,PPR|PF01535.16|6.8e+03,PPR|PF01535.16|6.7,PPR_3|PF13812.2|30,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|3e-05,PPR_3|PF13812.2|77,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|2.6e+02,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|2.3e+02,TPR_14|PF13428.2|2.2e+02,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|26,TPR_14|PF13428.2|16,TPR_14|PF13428.2|23,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|3e+03,TPR_19|PF14559.2|6.6e+02,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|13,TPR_19|PF14559.2|0.11,DYW_deaminase|PF14432.2|1.6e-05 S_Transcript_257500:147-1739(+)
MPERNSVSWATMISGYGSCGIAEEAVGLFKLIMRGEEERGNQFFLTSVLSALTVPELVGVGREVHCFAVKAGVVWIGEVRNALVTMYLKCGSPSDALRLFVMSTDKNPIMWSAMVTGLAQSGHSERALELFSEMHYSGVRPSEYTFVGVVNACSDIGALKEGKQVHCYSIKMGFEHQMYIITALVDMYAKCGSITDARKGFDHLQEPDVVLWTSMIGGYVQNGENEEALSLYARMEAKGISPNSLTIANVLKGCSSLAALEQGKQIHAHVVIYGIGLEIAIGSALSKMYAKCGCIDEGNMVFERMPERDVVSWNAMISGLAQNGCSEKALVLFDKMTSEGVKPDSVSFVNILSACSHIGLVERAWGYFKMMYTEFGIVPGLEHYACMVDVYSRAGRLTEAKEFIESATLEHGMCLWRILLSACRNHRHYELGAYAGEKLMELGSQESSAYVLLSRIYIALGKSDDAERVMRLMKLRRVDKELGCSWIEFKNLVHVFAVGDQRHPEIGDIRSWLRILTKQMMDEGYQPAYG*

Click here to download the sequence:
Link to NCBI Protein BLAST