Transcript Information: S_Transcript_257503.p1


Annotated TAIR IDAT3G15130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5097153-5099222 | Reverse length=689
E-Value4.2E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61267340973077
Replicate 20.31745020946065
Replicate 30.61033515096808
Condition 2: 8 Hour
Replicate 11.7489888461534
Replicate 22.2532797191092
Replicate 31.6868656378043
Condition 3: 24 Hour
Replicate 10.5971982536997
Replicate 20.58697641492698
Replicate 30.68952351611109


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_257503.p1 GENE.S_Transcript_257503~~S_Transcript_257503.p1 ORF type:complete len:695 (+),score=147.21,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|25,PPR_2|PF13041.2|4.6e-11,PPR_2|PF13041.2|13,PPR_2|PF13041.2|5.8e-06,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|6.4e-10,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|7.5e+03,PPR|PF01535.16|0.014,PPR|PF01535.16|0.0076,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.34,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|3.9e+02,PPR|PF01535.16|0.29,PPR|PF01535.16|0.001,PPR|PF01535.16|0.0013,PPR|PF01535.16|3.4e-07,PPR|PF01535.16|0.014,PPR|PF01535.16|0.021,PPR|PF01535.16|91,PPR|PF01535.16|7.7e+02,PPR|PF01535.16|1.1e+03,PPR_1|PF12854.3|0.044,PPR_1|PF12854.3|5.3,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.0055,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|44,PPR_1|PF12854.3|0.095,DYW_deaminase|PF14432.2|1.3e-30,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|8,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|1.9e+03 S_Transcript_257503:330-2414(+)
ATGAGCCAGTCGTTTACAAGTTTGTTAAGGAATGAACAGTTGAGGATAGCCAAATATTTGAGGTATTGTTCCAAGAATTTGTTGCTAGACAAAGGGAAACAGGCTCATGTAGCAGTGCTTAAGATGGGTTTTTGTTCTGACGTGATAATAAACAATGATCTTATTGATATGTATGGTAAGTGTAAGAGGATCGGCAGTGCCTGTAAGATGTTTGATAAAATGTCCCAAAGAAACGTGGTGTCTTGGACTGGTCTTATTTGTGGGTTTTTACATCAGGGGGATGCTGAAGGAGCATTATCTGTTTTGTATAGGATGAGCTTTTCTGATGTTCAACCCAATGAGTATACTTTTTCTGCTTGTTTCAAAGCTTGTGGGATTGTGGGTATCCCTGAAAAGGGAATGCAAGTACATGGCTTCTGTGTGAAAGTTGGGTATGAGTGGTTCCCTGTTGTGGCGAATTCTGTTGTTGACATGTATGCAAAGTGTGGGAGTATTAGAAGAGCAGCTCAAGCCTTTTATGATATGCCTGTCAAGAATCTTATAGCATGGAATACCATTATAGCCGGGTACAGTTCTGAAGGAAACGGCGTGGAAGCAATTGAAAGTTTCCTGAAAATGGTAAAGGAAGGTGAACGTCCGGATGAATACACATTTACGAGTGTGCTGAAAGCTTGTAGTATTGCTGGGGTTGTTCACTGGGGCACCCAGATTCATGCTGCCCTGATAACTAGAGGATTCCCAATTTTTGATCTGACAGCTATTGTTGGTGGACTTATAGACATGTATGTAAAGTGCAGTTGCCTACTTGAGGCCAGGAAGCTCTTTGATCACATTGAAGATAGAAATGTGGTCTCTTGGGCTTCTCTAGTTTTGGGTTATGCACAAGAAGGTTACCTTTCAGAAGCTATGGATATCTTTAGACAGGTTAGGGAGTGTGACATTCAGGTAGATGCCTTCACTCTGTCAGGATTAATTGGTATCTTTGCTGACTATGCTTTTGTGGAGCAAGGGAAGCAGATGCATTCTTATGTCATTAAGGTCCCTTCTGGTCTAGAACTAGAAGTTGCCAATTCAATTACTGATTTGTATCTTAAATGTGGATTGATGGATGAAGCAGAGAGGTTTTTCAATGAAATGCCTCTGAAAAATAGAGTTTCCTACACAGTTATGATTACTGGCTATGGGAAGTATGGTCTTGGGAAAGAAGCCATATTCCTTTTCAAGAAAATGCTTTCTGAAAACATAAGGCCTGACAGTGTAACTTACTTGGCTATTCTTTCAGCTTGTAGCCATTCAGGACTGATAGAAGAATGTCAAGAGTACTTCTCAAAATTGTGGAGCGATCGCTGGACCCAGCCAAGAGTGGAGCACTATTCTTGCATGGTTGATCTACTAGGTCGAGCTGGTCGCTTAAAAGATGCCAAAAATCTCATACAGAGCATGCCTGTGAAAGCAAACATAGGTGTATGGCAGACATTGTTGAGTGCTTGTAGGGTTCATGGAGACCTGGAACTTGGGAAAGAAATTGGAAAGATCATCTTAGAGTTGGATGGAGATAATCCGGTTAATTATGTTTTGATGTCAAACATTTATGCTAATGGCGGATACTGGAAGGAATCTCAAGTGCTGAGAGAAGTAGTGAAAAAGAAAGGTTTGAAGAAAGAGGCTGGCCAGAGTTGGGTTGACATTGACAAAGAGATTCATTTCTTTTATGGAGGAGATGATTCTCATCCACTAATCGAAAAAATTCACCAAGTATTGAAAGAAATGGAAAGGAGGTTAAAAGAAGAGTTGGGCTACACTCATGAAGTAAGGTTTGCATTACATGATGTGGAAGAAGAGTCAAAGGAGGAGAACTTGAGAGTTCACAGTGAGAAGTTGGCTATTGGCCTAGCATTGCTCTGTGGTGGAATGGAAAAGGATGGGAAGGTTATCAGGGTTTTCAAAAACTTGAGGGTTTGTGGGGATTGCCATGCATTCATCAAGGGTTTGTCGAAGGTTCTTAATAAGGTGTTTTTGGTCCGAGATGCCAATAGATTTCACAAATTCCAGGATGGTGTTTGTTCTTGTGGAGAATATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_257503.p1 GENE.S_Transcript_257503~~S_Transcript_257503.p1 ORF type:complete len:695 (+),score=147.21,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|25,PPR_2|PF13041.2|4.6e-11,PPR_2|PF13041.2|13,PPR_2|PF13041.2|5.8e-06,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|6.4e-10,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|7.5e+03,PPR|PF01535.16|0.014,PPR|PF01535.16|0.0076,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.34,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|3.9e+02,PPR|PF01535.16|0.29,PPR|PF01535.16|0.001,PPR|PF01535.16|0.0013,PPR|PF01535.16|3.4e-07,PPR|PF01535.16|0.014,PPR|PF01535.16|0.021,PPR|PF01535.16|91,PPR|PF01535.16|7.7e+02,PPR|PF01535.16|1.1e+03,PPR_1|PF12854.3|0.044,PPR_1|PF12854.3|5.3,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.0055,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|44,PPR_1|PF12854.3|0.095,DYW_deaminase|PF14432.2|1.3e-30,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|8,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|1.9e+03 S_Transcript_257503:330-2414(+)
MSQSFTSLLRNEQLRIAKYLRYCSKNLLLDKGKQAHVAVLKMGFCSDVIINNDLIDMYGKCKRIGSACKMFDKMSQRNVVSWTGLICGFLHQGDAEGALSVLYRMSFSDVQPNEYTFSACFKACGIVGIPEKGMQVHGFCVKVGYEWFPVVANSVVDMYAKCGSIRRAAQAFYDMPVKNLIAWNTIIAGYSSEGNGVEAIESFLKMVKEGERPDEYTFTSVLKACSIAGVVHWGTQIHAALITRGFPIFDLTAIVGGLIDMYVKCSCLLEARKLFDHIEDRNVVSWASLVLGYAQEGYLSEAMDIFRQVRECDIQVDAFTLSGLIGIFADYAFVEQGKQMHSYVIKVPSGLELEVANSITDLYLKCGLMDEAERFFNEMPLKNRVSYTVMITGYGKYGLGKEAIFLFKKMLSENIRPDSVTYLAILSACSHSGLIEECQEYFSKLWSDRWTQPRVEHYSCMVDLLGRAGRLKDAKNLIQSMPVKANIGVWQTLLSACRVHGDLELGKEIGKIILELDGDNPVNYVLMSNIYANGGYWKESQVLREVVKKKGLKKEAGQSWVDIDKEIHFFYGGDDSHPLIEKIHQVLKEMERRLKEELGYTHEVRFALHDVEEESKEENLRVHSEKLAIGLALLCGGMEKDGKVIRVFKNLRVCGDCHAFIKGLSKVLNKVFLVRDANRFHKFQDGVCSCGEYW*

Click here to download the sequence:
Link to NCBI Protein BLAST