Transcript Information: S_Transcript_257700.p1


Annotated TAIR IDAT1G66170.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)MMD1
Annotation TypeHomolog
Chromosome Positionchr1:24638793-24641222 | Reverse length=704
E-Value8E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.6151554899173
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_257700.p1 GENE.S_Transcript_257700~~S_Transcript_257700.p1 ORF type:complete len:520 (-),score=85.26,PHD|PF00628.25|2.7e-07 S_Transcript_257700:2041-3600(-)
ATGTGGCTACCATCATTACTCTACAGAAAGATTATGGTAGGGGATTTGTCAAGAAAGAGTTCAATGGATCTCCGATTGCTTTATGGCATTGCATATGGTCACCCTTGGTTTGGCAGATGGGGATACAAGTTCTCACATGGAAGCTTTGGAGTTCAAGAGCACCATTACCAAAAAGCTGTGGAGGTTCTTAGCTCTCTAGATCTTGATGACCTGGTTTTCATGCTCATCACACTCAGAGATCTCCTCAGGTTTATGCTCAACCTGAAGTCCCAGACTCCTGCCAGAACTAAAATGGCCTTGGCTGAGGCCTCATTGCCTACCTCCTTACCTTCGAAATACTCGTCCAAAATAACCCTGCAACACAGGAAGTCTCCTGCCAAAGCAAAACCTACAAAGTGCAAAAAATTTGCATCTCTGGCAGCTAACATGGACAGCAGATGGCCGACTAGGAGACTAGAATTTGCAGCTGATATAATTGTTAATGTCTTGAAGGAAAATAAGGAGACCAAACCTTTCCATATTGGAATGACTAGGCAAGAAGTTCGAGATGCTGCTCGACTTCATATTGGAGATACAGGGCTTCTTGATTATGTCCTGAAATCCATGAACAATGTGATTGTCAGAAATTCCATAGTTCGACGAAGAATTAACCCTGTAAATAGGGTTCTGGAGTACACCATTCACCAACTTGGTGAACCTTCACCAAGAGAGCCAAAGCGAGAAAATGCCCCTGTTGAACATGAAACCCTATCACTTACTAAACAACCTGGAGTAGATGTTTATCAAGATGTATACACCTTGTACCTACAGCTACTCTTGGTGCAGTCCAATTTACACAATTTTGGCACGTCAATCCATGTCATATTGGACACCAAACATTTTGTAAAAGAATGGCCTTTCAAGGACCGGGATGACCAGTTACTGAGGTTTGTATGCCATATCCTACCAACCTCAAGTGAGTTGGACATGGAGTTATCTAGGAAGTTTTCTCCTGGTGAGTTAATTGTTCTTCCATTGCATGCTTCCTTTGGTGAACTGAAGTTAGCGGTTCAACAGGCTCTACGAGACACTTACTGCATCATGGAACATTATGTGGTGAACGGGATAAAGAGCCTGGATAACTTGATTGATGAAGAGGCTGTGTTTGGCGAAGTTGAGTCGGGTTCTGATCTTTGGTTCAGGGGAAGTGGAATTGACTTGAGCACAGAGTTCAGGTATGAAGGCGGGCCTGATAATTGGACCGTAAGATGCTCGTGTGGAGCAAAGGATGATGATGGGGAAAGAATGGTGTCTTGTGACATCTGTGAGGTATGGCAACACACAAGGTGCAGGGGCATTGAGGATACAGAATCCGTCCCTCCTCTTTTCGTGTGCCACAGTTGCTGTTCTTCCCTTATACCTCCCAGAGCTGAGAGCATACTCCATTCGCAGAGTTCCGTAGACACGGTCCTGAGCTCGGAAATTGATAAACCCTGGATGCAGTTGCCATCAGAAGTTGAAGAACCCTGGATGGTGCTGTCACCAAAAATTGAGGAACCCTGGATGCTGCTCCAGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_257700.p1 GENE.S_Transcript_257700~~S_Transcript_257700.p1 ORF type:complete len:520 (-),score=85.26,PHD|PF00628.25|2.7e-07 S_Transcript_257700:2041-3600(-)
MWLPSLLYRKIMVGDLSRKSSMDLRLLYGIAYGHPWFGRWGYKFSHGSFGVQEHHYQKAVEVLSSLDLDDLVFMLITLRDLLRFMLNLKSQTPARTKMALAEASLPTSLPSKYSSKITLQHRKSPAKAKPTKCKKFASLAANMDSRWPTRRLEFAADIIVNVLKENKETKPFHIGMTRQEVRDAARLHIGDTGLLDYVLKSMNNVIVRNSIVRRRINPVNRVLEYTIHQLGEPSPREPKRENAPVEHETLSLTKQPGVDVYQDVYTLYLQLLLVQSNLHNFGTSIHVILDTKHFVKEWPFKDRDDQLLRFVCHILPTSSELDMELSRKFSPGELIVLPLHASFGELKLAVQQALRDTYCIMEHYVVNGIKSLDNLIDEEAVFGEVESGSDLWFRGSGIDLSTEFRYEGGPDNWTVRCSCGAKDDDGERMVSCDICEVWQHTRCRGIEDTESVPPLFVCHSCCSSLIPPRAESILHSQSSVDTVLSSEIDKPWMQLPSEVEEPWMVLSPKIEEPWMLLQY*

Click here to download the sequence:
Link to NCBI Protein BLAST