Transcript Information: S_Transcript_257870.p1


Annotated TAIR IDAT5G49610.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20131448-20132527 | Reverse length=359
E-Value5.4E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7027859789672
Replicate 27.5158953437688
Replicate 37.8026960353695
Condition 2: 8 Hour
Replicate 19.022280518787
Replicate 29.8337796218579
Replicate 38.1398429041
Condition 3: 24 Hour
Replicate 19.9022136701869
Replicate 25.9772689871685
Replicate 35.820471785796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_257870.p1 GENE.S_Transcript_257870~~S_Transcript_257870.p1 ORF type:complete len:364 (+),score=52.18,F-box-like|PF12937.3|4.2e-08,F-box-like|PF12937.3|1.1e+04,F-box|PF00646.29|8.4e-08,F-box|PF00646.29|3.5e+03 S_Transcript_257870:262-1353(+)
ATGAGTTTAGTCGATTCCAGAAATGGGTTTTTCCCAGATGAAGTTATTCTTCAAATCCTAGCAAGATTGCCCATAAAATCCCTTTTCAGGTTCAGGGCTGTGTGTAAATATTGGTACAAATTGCCCTCAGATAAGTACTTTGTTCAACTTTATAATGAAATGTCAGTTAAGAGTTCCATGATATTGGTTGAGATTACTGAGGTTTCTGACTCACAGTCTAGTTTAATATGTGTTGATTTTTTAAGGGGTGTGTCTGAATTTTCATTGAGTTTCTTGAAGGATAGGGTTAAGGTTAGAGCTTCATGTAATGGGTTGTTATGCTGTTCAAGTATTCCTGATAAGGGTGTGTTTTATGTGTGTAATCCTATGACTAGGGAGTTTAAGTTACTTCCAAGAAGTAGGGAGAGGCCTGTTACTAGGTTTTCTCCTGATGGTGAAGCAACTTTGGTTGGTATTGCTTGTGATTTGTCTGATATTACTAAGTTTAATGTTGTGTTGGCTGGTTATCATCGTCCGTTCGGCCAGAGGCCTGATAGGACCTTCATATGTATGGTGTATAATTCTGAGATGAATAGGTGGAGGAAATTTGTGTCGTTGCAGGATGAAAGTTTCACTCAAATGAATAGGAATCAAGTTGTGTTTGTGAATGGTATGTTGCATTGGTTGACACTGAGTTACTCGAGTGTACTTGTGTTGGATTTGGAGAATGATGCGTGGAGGAAGATTTATTTGCCGAGTGAGATGAGTTATGGTATTGGGAATCGAATGTATTTGCTGGAATCGGATGGTTGTTTGTCTGTAGTTCAGATTTCTGAAGCTTGGATGAATATATGGGTGTTGGAGGATTACGAGAAGGAGGATTGGAGATTGGTGGATAGGGTTAGTCTCAGATGTATTAAAGGATTGGTTCCAGGCATTTTTCCTATAAGCCAGACTAGTGATTGTGTTTTTCTAACTACTCATAAACAGGTATTGGTCTATCATAGGAGCACAAGGGTTTGGAAAGAAATGTACTCGGTGAAGAGCAATTCAATGCTGCCTCTGTGGTTCTCTGCTCATGCTTTTCGGAGTACAATCTTTTCGTGTCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_257870.p1 GENE.S_Transcript_257870~~S_Transcript_257870.p1 ORF type:complete len:364 (+),score=52.18,F-box-like|PF12937.3|4.2e-08,F-box-like|PF12937.3|1.1e+04,F-box|PF00646.29|8.4e-08,F-box|PF00646.29|3.5e+03 S_Transcript_257870:262-1353(+)
MSLVDSRNGFFPDEVILQILARLPIKSLFRFRAVCKYWYKLPSDKYFVQLYNEMSVKSSMILVEITEVSDSQSSLICVDFLRGVSEFSLSFLKDRVKVRASCNGLLCCSSIPDKGVFYVCNPMTREFKLLPRSRERPVTRFSPDGEATLVGIACDLSDITKFNVVLAGYHRPFGQRPDRTFICMVYNSEMNRWRKFVSLQDESFTQMNRNQVVFVNGMLHWLTLSYSSVLVLDLENDAWRKIYLPSEMSYGIGNRMYLLESDGCLSVVQISEAWMNIWVLEDYEKEDWRLVDRVSLRCIKGLVPGIFPISQTSDCVFLTTHKQVLVYHRSTRVWKEMYSVKSNSMLPLWFSAHAFRSTIFSCH*

Click here to download the sequence:
Link to NCBI Protein BLAST