Transcript Information: S_Transcript_257960.p1


Annotated TAIR IDAT4G36440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 41 Blast hits to 41 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17207213-17209873 | Reverse length=394
E-Value2.6E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8625741851412
Replicate 24.412557911503
Replicate 34.2231192771143
Condition 2: 8 Hour
Replicate 17.293901615715
Replicate 24.9282912945485
Replicate 36.858142272907
Condition 3: 24 Hour
Replicate 15.7619837612872
Replicate 25.1896843899462
Replicate 36.0679121322453


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_257960.p1 GENE.S_Transcript_257960~~S_Transcript_257960.p1 ORF type:5prime_partial len:345 (-),score=58.15 S_Transcript_257960:450-1484(-)
TCCGATTTGGTGGTTCGATTTTGCAAAGATGTCGAGAGTAGATCGCAAAAGGGATATGTCAACTTTGGCTGCTTCGATACATTCAACCATTTTGTTGCTGGTTCTGGGCGTGTAAACTTTGTTCAGGGATTTTACAAGGGGGATCTTGTGAATTGCGAGCAAACTTATGACAAAATGGGACGCACTGCTCAGGTGAACATTTTATGTGGAAGTTGTTCGAGTGGACAATGTAAAGGTGAACTTGGATGTATATGCAGTGTCTCTTATGAGTCATCTTGCAGGGTCGTTGTCGAACTTGCCATTCCTTGTGAGAAACAGGGGTCCAGGGTATTTGAAGGATTCACACTTGGTTTTCATCCACGGTCATGGGAAATCGTTTACAATGGCATGACTCAACTTGGGTTTGAGAAGTCTCACGATGAATTCAGTTTCAGCACCGAACAAACTCGTGTGACCCTTTATATGACTGTTGTGGCATCCTTGTCAAATTTGGTGCAAAAGCCATCTGTTAAGATATTCCCAGAAAATGGCCTAGAGGTTCAGCTCTCAGGCTCTGGTGCTGCAGGAAGACCACCAACAACTTTGTCACCAACTGTTTTGATTGTGGACTGGACATGTGTCAAGGTGCAAGATACACCATATGAAGTTGAAATCACAATTCCTATCAAGGATTATGAACCTATTCAGTTCACTCTTACAAAGATGTGTGAGCACAGGCAAAGTAATGGGAAAGATTCAACAAAAGGATGGGCTATATTTGGAATCCTATCCTGCATATTCTTGGTTTCATTGACACTGTTCTGCTGTGGAGGATTTATTTACAAATCACGGGTCCAAAACCTGCATGGACTCGATGCATTGCCAGCCGTGACCTATTTGTCTGCATGTCTACAGGCTGTAAGTGGAGGAGTGCAAGGCTACCAAAGGGCAGAAGATGGTAACAATCGTTTCATCAATGAACCATCATGGAGTAATCAGCCAACTACTGTTCAAGGAACTGGGAGACGAACTGAGGTCAGATATGGTTCTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_257960.p1 GENE.S_Transcript_257960~~S_Transcript_257960.p1 ORF type:5prime_partial len:345 (-),score=58.15 S_Transcript_257960:450-1484(-)
SDLVVRFCKDVESRSQKGYVNFGCFDTFNHFVAGSGRVNFVQGFYKGDLVNCEQTYDKMGRTAQVNILCGSCSSGQCKGELGCICSVSYESSCRVVVELAIPCEKQGSRVFEGFTLGFHPRSWEIVYNGMTQLGFEKSHDEFSFSTEQTRVTLYMTVVASLSNLVQKPSVKIFPENGLEVQLSGSGAAGRPPTTLSPTVLIVDWTCVKVQDTPYEVEITIPIKDYEPIQFTLTKMCEHRQSNGKDSTKGWAIFGILSCIFLVSLTLFCCGGFIYKSRVQNLHGLDALPAVTYLSACLQAVSGGVQGYQRAEDGNNRFINEPSWSNQPTTVQGTGRRTEVRYGSI*

Click here to download the sequence:
Link to NCBI Protein BLAST