Transcript Information: S_Transcript_257992.p1


Annotated TAIR IDAT5G16280.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5323377-5331345 | Reverse length=1272
E-Value1.9E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9315887993276
Replicate 22.3130343890943
Replicate 32.3797078817549
Condition 2: 8 Hour
Replicate 13.2676001292381
Replicate 24.1496170864009
Replicate 33.9537459267304
Condition 3: 24 Hour
Replicate 12.6425262287009
Replicate 21.827726740028
Replicate 32.8476501747712


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_257992.p1 GENE.S_Transcript_257992~~S_Transcript_257992.p1 ORF type:3prime_partial len:124 (-),score=18.69 S_Transcript_257992:2-370(-)
ATGGTGGATCCGGTGAATACAACGCTAGGGAAGATGTTAATGAAGGAGATAACGCCAGTAGTGATGGTGCTATGTACACCACTCGTTGAACAAGCTTGTAAGAAGAATGGCCTCAACTTCGTTGACATGCTCTCTCCTTTCTCCGTCTTTGATAACATTGACGTACCTGTACGGACCGCAAGTGATCAGCCTTATAGGCTTCAAAAGTTCAAATTAAGATTGTTCTATGCTTCTGATATTCGGAAGCCTGAATTTGAGGCAGCAAGAGCTCGGCTGAACAAAGTGGTTACTGGAGCTACAGACAAGGATAATTCGGACAATTGTTTGGAGCTCCATGACAATGAAAATATTGCCACAATTTCGAAGTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_257992.p1 GENE.S_Transcript_257992~~S_Transcript_257992.p1 ORF type:3prime_partial len:124 (-),score=18.69 S_Transcript_257992:2-370(-)
MVDPVNTTLGKMLMKEITPVVMVLCTPLVEQACKKNGLNFVDMLSPFSVFDNIDVPVRTASDQPYRLQKFKLRLFYASDIRKPEFEAARARLNKVVTGATDKDNSDNCLELHDNENIATISKS

Click here to download the sequence:
Link to NCBI Protein BLAST