Transcript Information: S_Transcript_258089.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8727874931793
Replicate 23.5399251901983
Replicate 33.7160736884867
Condition 2: 8 Hour
Replicate 15.96792639472
Replicate 25.6764392070948
Replicate 36.1243293491924
Condition 3: 24 Hour
Replicate 13.5864734089035
Replicate 24.0591901330771
Replicate 31.976354225774


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258089.p1 GENE.S_Transcript_258089~~S_Transcript_258089.p1 ORF type:3prime_partial len:268 (+),score=38.08,Skp1_POZ|PF03931.11|1.3e+04,Skp1_POZ|PF03931.11|5.4e-23 S_Transcript_258089:213-1013(+)
ATGAATGTTAGTCAGAATAAGTGGGTTGTCTTTAAGTGGCTTTCTATGGTGCTAAATGTGCTGATTGAATTGTGTCAAGCAATAGTAACTCAGGAGAACGGACAAGGTAAAATTAACCGTCACTTGTATCTTCGGATTTGCGTTGTTACCTCTTGTTGTTGCTTAATGGTATCCATCATTGAGATTATACGTGAATGGAAGGAAAGCAAAGTGGTGTGGAGACAGAGAAGTTTTTACTGGCAAGGGCAGCTAAAAGGGAGGTTCTCGGTCTATTTTGGCATCATAAGCTCTGTGGTCCAATTGGTGATTAATTTGGTAGCAGTAGTGAGGAAAAATAATGTGGTGAGATTCGATATCTTGCCATTGTTACTTTCGTTTGGTTATTTGATAGCTGCGATGGTTAATCCAGGGGAACAGACGAGGGTGATCTGCAGAATTCGTAGCAGTTTCCCCTTGGTGTCTGTCTCAATCAAAAGCGTTTCGGGTTCTCAAGGAGCAACAGAATCTGTAGTGGCAACGTTGAGGCCGAAGATGGTGACACTCCAGAGCTCAGATGGGGAGAATTTTGAAGTAAATGAGGCAGTGGCGATGCAGTCGGAGCTCATAGAGGATATGATCGAACAAGGCTCGACTGACAATGACAGCATCATACCTCTGCCCCAGGTCAGCAGCCAGATACTGTCTAAGGTTGTTGAGTACATGATCAAGGAGCATGCTCAGGATGAAGAAGAAGATGAAGAGGAGGAAGGGGACGAGAAAGAGGTGTGGGATGCTGCACAGTTTGTGAAATCATTGAACCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258089.p1 GENE.S_Transcript_258089~~S_Transcript_258089.p1 ORF type:3prime_partial len:268 (+),score=38.08,Skp1_POZ|PF03931.11|1.3e+04,Skp1_POZ|PF03931.11|5.4e-23 S_Transcript_258089:213-1013(+)
MNVSQNKWVVFKWLSMVLNVLIELCQAIVTQENGQGKINRHLYLRICVVTSCCCLMVSIIEIIREWKESKVVWRQRSFYWQGQLKGRFSVYFGIISSVVQLVINLVAVVRKNNVVRFDILPLLLSFGYLIAAMVNPGEQTRVICRIRSSFPLVSVSIKSVSGSQGATESVVATLRPKMVTLQSSDGENFEVNEAVAMQSELIEDMIEQGSTDNDSIIPLPQVSSQILSKVVEYMIKEHAQDEEEDEEEEGDEKEVWDAAQFVKSLNQ

Click here to download the sequence:
Link to NCBI Protein BLAST