Transcript Information: S_Transcript_258122.p1


Annotated TAIR IDAT2G19910.1
Annotated Gene NameRNA-dependent RNA polymerase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8595820-8600757 | Reverse length=992
E-Value2E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59359854056165
Replicate 20.5331157328024
Replicate 30.30852160734648
Condition 2: 8 Hour
Replicate 11.149509886983
Replicate 21.039584044597
Replicate 31.7036829870152
Condition 3: 24 Hour
Replicate 10.89328519850013
Replicate 20.5897646135109
Replicate 30.37504898743667


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258122.p1 GENE.S_Transcript_258122~~S_Transcript_258122.p1 ORF type:3prime_partial len:538 (+),score=89.79,RdRP|PF05183.8|1.4e-46 S_Transcript_258122:107-1717(+)
ATGGCGGATTCTGCCTCTCCATTGTCAAAACACGGCGTATCTCTTCCACACTCAGTCGAATCGATGATCGAGACGATATGCAGGGAGCAATCGCAACCACAACCGGGACTAGCGGCTAGAAAGGAGCTTCAATCACTCGGTGAACAGGAATCCCTAGAAATCCTCAACGTAATACGTAATTCCAGGATTTCTAAGACTTTTCACGGCTTCATTCTTTACTTGGCTGGAAGGAGAAAGTCCCTATCGCCATGTCGTACCGATGGTAACTTCAGCATTGCTTCTCCTCAACCACAGCAAGATATAGCAGATGGGATGGCTAGTTCACACTTCCGTAGTCCTCAGTTTCTTGCATTGCAGGGGCTTGAATTTAGAAGGCTTTTCTTGCTTCTAAGTTACATTGGGAGGAAGAAGTTGGAGGATGTGGCTTCAGTTGATGACATCAAAAACCTTCGAACTCAAAGCGAACAACTCACAATGGGATCTTATGAGTCTTTTATTTGGAATAAATTTGGCCAGCCTGGCGAGGACATTGATCGATTGAAGTATCGTGACTGGGATCCTAGACGGAAAAATTACTATTATCATTGCCATGTTTATTCAGATGGAAGCTATGCTTTCAAGGGTCCATATCTCAACTCCACAAGCACTCTCCTTCAAAGGGTTTTAAAAGATGAGAATGTGCTCATTGTGAAGTTTTCTGAAGAAAATAAAAATACAGTTGCAACAGGCCACTCTGATATACTGCACAAATTTCGTAAAGTTGCAGATGATGGAATTTGGCTTGGTGATATCTGCTACCGCTTTTTTGTTTTCAAAGATGGAGGGAAAGAGGCGAAGAAAAAGGACCCAGCATCAAGCTCTGTCAAGTGCTATTTCGTTAATGTGGAGGCTTTTGCACAAACTTTAAAGAGAAGACCTAGCTGTTCCGGAAAGATATCTATCCATGAAATGAGGTGCATCTTTATGCATGTGCATACTGTGTCCAGCTTATCAGCATATATGGCTAGGTTTTCACTTATACTATCAAAGACCGTTAAATTAGAAGTCAATCTGGATGGTGTTTGTGTTCGAGATATTGATGACATAGCTTGCAAGAATGAAGATGGATCTTTTGTTTATGGTAAAGATGGAAAACTCCTCATACAGACTGATGGTACTGGTTTCATTTCGGAAGACTTAGCTCTGAGGTGTCCTAGAAATTGCTATAAAGGAAGCTTCCCAAATGATGCAAACTTTGAGAGATATCTTGATGTCATCAAACTTGTAGACAATTCCTTGGAACAAAGCCTAAAAAGTCGTCGTTCAGAGCCGCCATTGTTGATCCAGTTCCGTATGTTACATAATGGGCGTGCTGTTAAGGGAACTGTTCTTGTTAATAAACAGCTTCCAGAAAGAGCAATCCAGATTCGACGTTCTATGATTAAGGTCCACACTGATCGCGAATTTCAGGGACCTCCAACTATAAATTCATTTGAGATTGTCTCAACCAGCAATCGGCCAAAGAAACCACATTTCTCAAGATTCTTGATTGCACTTCTTCATTATGGAGGTGTTCCAAGGGAGTTCTTTACTGATATTCTAGATGAAGCTGTTGCTGACACTCAAAATGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258122.p1 GENE.S_Transcript_258122~~S_Transcript_258122.p1 ORF type:3prime_partial len:538 (+),score=89.79,RdRP|PF05183.8|1.4e-46 S_Transcript_258122:107-1717(+)
MADSASPLSKHGVSLPHSVESMIETICREQSQPQPGLAARKELQSLGEQESLEILNVIRNSRISKTFHGFILYLAGRRKSLSPCRTDGNFSIASPQPQQDIADGMASSHFRSPQFLALQGLEFRRLFLLLSYIGRKKLEDVASVDDIKNLRTQSEQLTMGSYESFIWNKFGQPGEDIDRLKYRDWDPRRKNYYYHCHVYSDGSYAFKGPYLNSTSTLLQRVLKDENVLIVKFSEENKNTVATGHSDILHKFRKVADDGIWLGDICYRFFVFKDGGKEAKKKDPASSSVKCYFVNVEAFAQTLKRRPSCSGKISIHEMRCIFMHVHTVSSLSAYMARFSLILSKTVKLEVNLDGVCVRDIDDIACKNEDGSFVYGKDGKLLIQTDGTGFISEDLALRCPRNCYKGSFPNDANFERYLDVIKLVDNSLEQSLKSRRSEPPLLIQFRMLHNGRAVKGTVLVNKQLPERAIQIRRSMIKVHTDREFQGPPTINSFEIVSTSNRPKKPHFSRFLIALLHYGGVPREFFTDILDEAVADTQNA

Click here to download the sequence:
Link to NCBI Protein BLAST