Transcript Information: S_Transcript_258207.p3


Annotated TAIR IDAT1G33710.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12219657-12220289 | Forward length=210
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88710004117268
Replicate 21.225710530973
Replicate 30.81967715927114
Condition 2: 8 Hour
Replicate 10.35542317195222
Replicate 21.3671685279833
Replicate 30.71052825349938
Condition 3: 24 Hour
Replicate 11.5776860298763
Replicate 20.75546038587825
Replicate 30.70061234458656


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258207.p3 GENE.S_Transcript_258207~~S_Transcript_258207.p3 ORF type:complete len:180 (+),score=24.22,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|5.7e+03 S_Transcript_258207:4081-4620(+)
ATGAAAATAAAGGAGATTTACAAAAGGCTGCAGGGCGACTTTGTGAAGGTAGAGTGGAAGAACCTGATCTGTAACAATGCTGCAAGGCCCAAAGCGTGCTTCTCTTTGTGGCTGCTGCTGCTACAAAGGCATTCTACTAAAGATAGGCTCTACAGGTGGGGGATTAACTGTGACAGGACCTGTGAACTCTGCAAAACTGAGGAGGAGTCTCATGAACATCTTATCTTTACTTGCAGCTATACCAGGCAGATATGGGTGGGAGTCTTGACAGGCCTTCGATTAAAAACTGGAGCCGTACCTCTCTCTTGGCATCAAGGTCTTCAATGGATGATTAAACATGGAAAAGGAAAATCTTCAACTGCGAAGATGTTTCGAATGATACTTGCTGAACTTTGGTATGCTATCTGGAATGAAAGGAATAATCGAGTCTTTGTGAAGAAGGAGCAAACACAGAGTAGTCTAATTAAAACTGCTATGTATGCTGTGGCCATCAGAGGCTATATGTACCCAAAGCTTAGTGAGCGTCTGAATAGTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258207.p3 GENE.S_Transcript_258207~~S_Transcript_258207.p3 ORF type:complete len:180 (+),score=24.22,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|5.7e+03 S_Transcript_258207:4081-4620(+)
MKIKEIYKRLQGDFVKVEWKNLICNNAARPKACFSLWLLLLQRHSTKDRLYRWGINCDRTCELCKTEEESHEHLIFTCSYTRQIWVGVLTGLRLKTGAVPLSWHQGLQWMIKHGKGKSSTAKMFRMILAELWYAIWNERNNRVFVKKEQTQSSLIKTAMYAVAIRGYMYPKLSERLNSL*

Click here to download the sequence:
Link to NCBI Protein BLAST