Transcript Information: S_Transcript_258342.p1


Annotated TAIR IDAT5G27260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9603943-9604930 | Forward length=303
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.457888649109
Replicate 21.3350095592127
Replicate 31.1159617375427
Condition 2: 8 Hour
Replicate 12.4449492083337
Replicate 22.6361732473563
Replicate 32.9190491943127
Condition 3: 24 Hour
Replicate 12.2262301646465
Replicate 21.6600881090955
Replicate 32.9720243407302


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258342.p1 GENE.S_Transcript_258342~~S_Transcript_258342.p1 ORF type:complete len:314 (+),score=71.07,Myb_DNA-bind_3|PF12776.3|9.1e-09,Myb_DNA-bind_3|PF12776.3|1.6e+02,Myb_DNA-bind_3|PF12776.3|1.2e+04 S_Transcript_258342:1853-2794(+)
ATGCACATGGTAGAAGACACTAAGGAAGATGCAAAAAATTTAGCCATTCAGCAAAGAGAAAAGAGAGAATGGACAGCCAAGGAAGAAGCGACCCTTGTTGATATCTTGTATGAGATGAACAACAGTCCATGGAAAGTGGACACAGGTTTCAAAATAGTTTATGTTTCACATGTTGGGAAAGAAATGGATAAGAGACTACCTAAAAGTGGTTTGAAAGCTAATCCTCATATTCAATTGAAAGTGAAGATTCTAAAGAAACAGTTTTGTTATATTATTGATATCCAGATGCAGGGAAGTGGTTTTGGATGGGATGATGAGAAAAAGATGGTGAATGGAGATGAGGAAGTGTTCATGGAATGGGCTAAGAGTCGACAAGGAGCTTCATCTTTATACAAGAAGATTTTTGTTCACTATGAAATACTATGTGAGATATACCAAAAGGATATGACAAAAGGAAACAAAGTTAAAGGTCCTGGAGAACAGTTAGATACAAACGAAGATCAATCCAAGATGAACGTCCAGCCTCAAGTTAGTAGCCACACTCCCAATCAAACAACTTCTATGATTGAAGGTAGCAGTACTACTCCCATCACCTCTAAACATGCTTGTAAGAGGAAAACAACGGAGTTGGATTATTTAGAATTACAGTTGACTCAAAAATCTGAATCAATTACAAGCTCATTGGATGCTAACAAGGATATTGAATTGATGAATGACATTAAGAAGGCACTTAAGCATCATGTTGAAGTTCACGAGGAGACTAGTGGCAAGAGGAAACAACTCTTTCAAGTTTTAAGTAGTATTAGTGGTCTCAATCCTGACCAAGTGGTCAAAGCTACTCGTCTTATTGGCCAAGATGAAGCAAAGTTAGATATGTTTTTTAGCATGCCTGATGATTACAAGGTGGTGTTTGCCCTACAGGAAATTGATAGTGTTAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258342.p1 GENE.S_Transcript_258342~~S_Transcript_258342.p1 ORF type:complete len:314 (+),score=71.07,Myb_DNA-bind_3|PF12776.3|9.1e-09,Myb_DNA-bind_3|PF12776.3|1.6e+02,Myb_DNA-bind_3|PF12776.3|1.2e+04 S_Transcript_258342:1853-2794(+)
MHMVEDTKEDAKNLAIQQREKREWTAKEEATLVDILYEMNNSPWKVDTGFKIVYVSHVGKEMDKRLPKSGLKANPHIQLKVKILKKQFCYIIDIQMQGSGFGWDDEKKMVNGDEEVFMEWAKSRQGASSLYKKIFVHYEILCEIYQKDMTKGNKVKGPGEQLDTNEDQSKMNVQPQVSSHTPNQTTSMIEGSSTTPITSKHACKRKTTELDYLELQLTQKSESITSSLDANKDIELMNDIKKALKHHVEVHEETSGKRKQLFQVLSSISGLNPDQVVKATRLIGQDEAKLDMFFSMPDDYKVVFALQEIDSVK*

Click here to download the sequence:
Link to NCBI Protein BLAST