Transcript Information: S_Transcript_258345.p1


Annotated TAIR IDAT5G27260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9603943-9604930 | Forward length=303
E-Value1.4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3851274691907
Replicate 20.72848833444624
Replicate 32.6968151820359
Condition 2: 8 Hour
Replicate 13.218926840322
Replicate 23.6934655773134
Replicate 31.4076503135365
Condition 3: 24 Hour
Replicate 12.2669218716654
Replicate 21.3897620306251
Replicate 32.0225224287121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258345.p1 GENE.S_Transcript_258345~~S_Transcript_258345.p1 ORF type:internal len:212 (+),score=41.86,Myb_DNA-bind_3|PF12776.3|3.8e-09,Myb_DNA-bind_3|PF12776.3|1.6e+02 S_Transcript_258345:3-635(+)
TTTACCGCCATAAGTGCCTGCTCATTGTTTGCTGCTTACTACAATCACCATATCAAGTCCAAACCATCTTACTCTTGTCAGGAAATGCACATGGTAGAAGACACTAAGGAAGATGCAAAAAATTTAGCCATTCAGCAAAGAGAAAAGAGAGAATGGACAGCCAAGGAAGAAGCGACCCTTGTTGATATCTTGTATGAGATGAACAACAGTCCATGGAAAGTGGACACAGGTTTCAAAATAGTTTATGTTTCACATGTTGGGAAAGAAATGGATAAGAGACTACCTAAAAGTGGTTTGAAAGCTAATCCTCATATTCAATTGAAAGTGAAGATTCTAAAGAAACAGTTTTGTTATATTATTGATATCCAGATGCAGGGAAGTGGTTTTGGATGGGATGATGAGAAAAAGATGGTGAATGGAGATGAGGAAGTGTTCATGGAATGGGCTAAGAGTCGACAAGGAGCTTCATCTTTATACAAGAAGATTTTTGTTCACTATGAAATACTATGTGAGATATACCAAAAGGATATGACAAAAGGAAACAAAGTTAAAGGTCCTGGAGAACAGTTAGATACAAACGAAGATCAATCCAAGATGAACGTCCAGCCTCAAGTTAGTAGCCACACTCCCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258345.p1 GENE.S_Transcript_258345~~S_Transcript_258345.p1 ORF type:internal len:212 (+),score=41.86,Myb_DNA-bind_3|PF12776.3|3.8e-09,Myb_DNA-bind_3|PF12776.3|1.6e+02 S_Transcript_258345:3-635(+)
FTAISACSLFAAYYNHHIKSKPSYSCQEMHMVEDTKEDAKNLAIQQREKREWTAKEEATLVDILYEMNNSPWKVDTGFKIVYVSHVGKEMDKRLPKSGLKANPHIQLKVKILKKQFCYIIDIQMQGSGFGWDDEKKMVNGDEEVFMEWAKSRQGASSLYKKIFVHYEILCEIYQKDMTKGNKVKGPGEQLDTNEDQSKMNVQPQVSSHTPN

Click here to download the sequence:
Link to NCBI Protein BLAST