Transcript Information: S_Transcript_258358.p1


Annotated TAIR IDAT3G16730.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5695633-5698863 | Reverse length=683
E-Value4E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3734652379492
Replicate 25.4771260789635
Replicate 33.9335905632854
Condition 2: 8 Hour
Replicate 15.4431940319955
Replicate 24.3805018315549
Replicate 35.0681036263592
Condition 3: 24 Hour
Replicate 15.8813147859292
Replicate 24.5961575924061
Replicate 35.7322828193446


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258358.p1 GENE.S_Transcript_258358~~S_Transcript_258358.p1 ORF type:internal len:286 (-),score=89.46,CNDH2_C|PF16858.1|2.1e-10 S_Transcript_258358:3-857(-)
GGTGAAGGGCAATATGGTGGCTATCGAGGGAGCTCTTTGATCTCAAAAGCTCATAGAAGTTTTCTTTCTCCTGCCAGCAGAAGATCTGGAGGGACCGCCCGCAAGTCATCTGTCAAGAGAGGACAGGGTACCAGCCAGGCTTCACCAGGTGGTGGTGGTGGTGTTTTAATGCCCAACCATGATTTCAAAGCTGGTCCTTCTAATTTTGGTATCCCTGATAATGGAGACCATGGAGTTGAATTAGATGATAATCATTCACAATATGGGAATTTGGATGAATCTGATGATGATGATCCTTGGAAGCCGTTAAATCCTCATGAAGCTGGAAACTTAAAAGTGAAGCCTTTCAGAAAAGTTAAGGTTCGCAGGTGTTCTGGGATGACAAAGCACGACAACATTAATTCTCAATTTCCCATTGCAAAGTTGCATGGAACGATTAATCCAGAGCTTACAGAAATTTGGGAGACGCAACTATGTGTTCATAATAGACAAGAATCCCAACCACCTCCATTGTATGAGAAGCTGCGGAAATCCCTTGCTGATGGTGGAACAAGTCCTGATACCTCAATCCCTCTTGAGGATGGTGATGCAGAAAACATTTTTGATGATTTTGACCATCCTGATTTTGACCAACCTGATTTTGACATGCCAGAGATGACTTACATGGATGGAGTAAATAGTCAGCCAGATAATCATGATTATTTTGCTGATAAATGTGACAATGTAAGTGCTGCCGTCAATGAGGATCCCAATTCTCAAGCAAGCCTGGAAGACCTTTGTTGTGCTCACCTGGATGCCCTTCTTGCTAGCATAGCTGAGAATGAGAAGCAGACTGAATTGGCTGCTCGAGTTTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258358.p1 GENE.S_Transcript_258358~~S_Transcript_258358.p1 ORF type:internal len:286 (-),score=89.46,CNDH2_C|PF16858.1|2.1e-10 S_Transcript_258358:3-857(-)
GEGQYGGYRGSSLISKAHRSFLSPASRRSGGTARKSSVKRGQGTSQASPGGGGGVLMPNHDFKAGPSNFGIPDNGDHGVELDDNHSQYGNLDESDDDDPWKPLNPHEAGNLKVKPFRKVKVRRCSGMTKHDNINSQFPIAKLHGTINPELTEIWETQLCVHNRQESQPPPLYEKLRKSLADGGTSPDTSIPLEDGDAENIFDDFDHPDFDQPDFDMPEMTYMDGVNSQPDNHDYFADKCDNVSAAVNEDPNSQASLEDLCCAHLDALLASIAENEKQTELAARVS

Click here to download the sequence:
Link to NCBI Protein BLAST