Transcript Information: S_Transcript_258372.p1


Annotated TAIR IDAT5G04560.2
Annotated Gene NameHhH-GPD base excision DNA repair family protein
Annotated Gene Symbol(s)DME
Annotation TypeHomolog
Chromosome Positionchr5:1309786-1318091 | Forward length=1987
E-Value8E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2410948408573
Replicate 23.1352385160679
Replicate 31.941340640379
Condition 2: 8 Hour
Replicate 12.5814946173372
Replicate 22.5904245793368
Replicate 32.2437734321033
Condition 3: 24 Hour
Replicate 12.1844883490594
Replicate 22.1470979388119
Replicate 31.9912140319828


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258372.p1 GENE.S_Transcript_258372~~S_Transcript_258372.p1 ORF type:5prime_partial len:190 (-),score=44.36 S_Transcript_258372:594-1163(-)
ACAAACATGACAATTTCTTCTTATTGCAGTGCTAGGCTTGCTCTCCCAGGCCCGGAAGAAAGAAGCATTATGCCCTCAGCTGGGAGCAATTCAGCACATCTTCATCCCCAAGCTAATATCAACCCTTCACCATTGCCTCCCTCTTGGAGCAACCAACACCAAAACACAAACTTTGGAAGCAACAAATATCCACCTATGATTGAAGTTCCATCTACCCCGCTGTCACTGCCCTTGCCACAGACAATCCATCACTTGCAGAGGCCATCTCAAATTAACTGTGAGCCAATTGTGGAAGCTCCTGCCTCACCAGAACCAGAACCAGAACCAGAACAGGAACATACATTAGGCGACATTGAAGATACTTTCTATGAGGATCCTGATGAAATTCCAACAATTAAGCTTAACATGAAACAGTTCACTCATACACTTCAGAACTTTATGCAAGCAAACAAGGAACTTCAAGAGACTGGAATGTCAAGGGCCTTGGTGGCATTGACACCTGACACTGCTTCTATTCCTACACCAAAGCTCAAGAACATCAGCCGGCTAAGAACGGAGCATCATGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258372.p1 GENE.S_Transcript_258372~~S_Transcript_258372.p1 ORF type:5prime_partial len:190 (-),score=44.36 S_Transcript_258372:594-1163(-)
TNMTISSYCSARLALPGPEERSIMPSAGSNSAHLHPQANINPSPLPPSWSNQHQNTNFGSNKYPPMIEVPSTPLSLPLPQTIHHLQRPSQINCEPIVEAPASPEPEPEPEQEHTLGDIEDTFYEDPDEIPTIKLNMKQFTHTLQNFMQANKELQETGMSRALVALTPDTASIPTPKLKNISRLRTEHHV*

Click here to download the sequence:
Link to NCBI Protein BLAST