Transcript Information: S_Transcript_258396.p2


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.19013129983093
Condition 2: 8 Hour
Replicate 10
Replicate 20.23063761484254
Replicate 30.65925301871076
Condition 3: 24 Hour
Replicate 10.22520498443911
Replicate 20.2336475420242
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258396.p2 GENE.S_Transcript_258396~~S_Transcript_258396.p2 ORF type:internal len:97 (+),score=20.14,zf-RVT|PF13966.2|2.7e-07,zf-RVT|PF13966.2|8.2e+02 S_Transcript_258396:3-290(+)
CCGAATGTGTGCTTTATGTGCAGGGAGAGTGGGGAGACTGCTTCTCATCTGTTCCTCCATTGCCCGGTTGCTCGGTCTTTGTGGGCTTTGTTGTTTGGTTTGTGTGGGGAGGACCTGGTGTGTCCTTCTACTGTTACGGAGTTCCTTCAGGTTCATTTCATGGGGTTTGGTCGGAATAAGGAGTTGGGTATGTTATGGCGCAATGCGATTTTTGCTATCCTGTGGTCTGTTTGGTTGGAGAGGAATGCTAGAGTGTTCAAGCAGGTTTCTCTTCCTCCTTCCCTCCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258396.p2 GENE.S_Transcript_258396~~S_Transcript_258396.p2 ORF type:internal len:97 (+),score=20.14,zf-RVT|PF13966.2|2.7e-07,zf-RVT|PF13966.2|8.2e+02 S_Transcript_258396:3-290(+)
PNVCFMCRESGETASHLFLHCPVARSLWALLFGLCGEDLVCPSTVTEFLQVHFMGFGRNKELGMLWRNAIFAILWSVWLERNARVFKQVSLPPSLL

Click here to download the sequence:
Link to NCBI Protein BLAST