Transcript Information: S_Transcript_258525.p1


Annotated TAIR IDAT4G02750.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:1221116-1223461 | Reverse length=781
E-Value2E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32112218684984
Replicate 20.23294046289986
Replicate 30.13908549082655
Condition 2: 8 Hour
Replicate 10.61113486580019
Replicate 21.1135309277692
Replicate 30.57871079470538
Condition 3: 24 Hour
Replicate 10.098845626654272
Replicate 20.17091863933897
Replicate 30.22825379552141


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258525.p1 GENE.S_Transcript_258525~~S_Transcript_258525.p1 ORF type:complete len:663 (+),score=116.31,PPR|PF01535.16|0.00069,PPR|PF01535.16|9e-07,PPR|PF01535.16|0.071,PPR|PF01535.16|2.8e-09,PPR|PF01535.16|0.15,PPR|PF01535.16|0.028,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|5.3e-08,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|0.00014,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|5.1,PPR|PF01535.16|0.033,PPR|PF01535.16|20,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|1.4e-12,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|3.3e-11,PPR_2|PF13041.2|0.0068,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|9e+02,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|3.8e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.004,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|10,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|3.7e-05,PPR_1|PF12854.3|10,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|3.3e-06,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.011,DYW_deaminase|PF14432.2|3.2e-36,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1e+02,TPR_14|PF13428.2|5.2e+03,TPR_14|PF13428.2|6.6,TPR_14|PF13428.2|3,TPR_14|PF13428.2|7.1e+02,TPR_14|PF13428.2|1.6e+02,TPR_19|PF14559.2|4.4e+03,TPR_19|PF14559.2|4.3e+02,TPR_19|PF14559.2|0.24,TPR_19|PF14559.2|71,TPR_19|PF14559.2|1.3e+04,TPR_19|PF14559.2|3.6e+02,TPR_19|PF14559.2|3.4e+02 S_Transcript_258525:437-2425(+)
ATGTATTTGTGTACCCAATATTGGTTAAATCAGCAGGTAAATATGGTATTGCAGTGCATGCTCATGTTGTCAAAGTGGGTTTTGCTTGTGATCGTATTGTTTCTAATGCATGCAATCATGGATATGTATTCCAAACATGGACTGCTTGAAGTAGCCCGCCAAGTGTTTGATGAAATGCCTGAGAGAAGTATTGCCGATTGGAACTGTATGATTTCTGGGTATTGGAGGTGGGGGTTGGAAGATGAAGCTTGTGAGTTGTTTGATTTAATGCCTGAAAGGAATGTGATTAGTTGGACTTGTATGGTTACTGGGTTTTCGAGAATGAAGGACTTGAAGAACGCTAGGATGTATTTTGATGCTATCCCAGAGAAGAGTGTTGTATCTTGGAATGCAATGTTATCTGGGTATGCTCAGAATGGGTTCGAGAACGAAGCTTTGAAGTTATTTGATGAGATGTTGAATGCTGGGGTTCACCCTGATGAGAGGACATGGGTCACCATCATCTCGGCTTGTTCTTCTAGTGGTGATCCTTGCATTGCGGAAGGACTTTTAAGAAAGTTTGATGAGAAAAAGGTCCCTGTGAATTTGTTTATCAAGACAGCAATTGTAGATATGTATGCAAAATGTGGCAAGTTAGAGGACGCGCGAAATATCTTTGATGGATTAAGAGGCCGAGGAAATTCTGCTGTATGGAACGCGATGATCTCAGCATATGCACGTATTGGAGATCTCACTTCAGCAAGGGATCTCTTTGACAAGATGCCTGACAAGGATGTCGTGTCCTGGAACTCTATGATTGCTGGTTATGCCCAAAATGGCCAGTCACCTCAGGCCATTGAATTGTTTAAACAAATGATCAAGATTAGCCACCCTAAACCAGATGAGGTGACCATGGTGAGTGTACTGTCAGCTTGTGGACATCTTGGAGCATTAGAATTGGGGAATCAGATAGTAAATTTGCTTTCCAAATCAGAGATCAAACTCAGCCTTGCAGGGTGCAATTCAATGATATTCATGTACTCCAAATGTGGTAGTATGAAAGATGCAATGAGGGTCTTTGGGGAAATGGATGTGAGAGATGTGGTTTCCTACAATACACTAATCACAGGTTTTGCAGCTCAGGGCAATGGAATTGAAGCTATTGCGCTTGTTTCGAGAATGGAGGAAGAAGGCATTAAACCAGACAGTCTAACGTTCATAGGGGTTCTGACTGCTTGCAGTCATGCAGGTTTAGTAGAAGAAGGTCACAAGGTGTTTGAATCTATTAATTACCCATCGGTTGATCACTATGCATGTATGGTTGACCTTTTGGGTCGAGTAGGTGAGGTGGATAAAGCTCTACAATTGGTCAAGAGAATGCCAATGGAACCCCATGCAGGGGTGTATGGATCTCTTCTCAATGCCAGCCGAATTCACAAGAGGGTTGAAGTAGGCGAACTTGCTGCTTCCAAGCTGTTTGAGCTTGAACCCGACAACTCTGGGAATTATGTCTTGCTATCCAACATATACGCTGTGGCTGGTAGGTGGAAGGATGTTGAGAGGACCAGGGAAGCTATGAAGGCAAGGGGATTGAGTAAGGCAACAGGATGGAGTTTGGTCGAATATGGTGGCAAAATGCATAAATTTACAGCAGGAGATAGATCACATGAAAAATCAGAAGAGATATACAGAATCTTGTCAGAGTTGAGATTGAAGATGAGACAATCTGGATATTTTGCCGACAAAAGTTGTGTCTTGACCGATATTGAGGAGGAAGAGAAAGAAGAGATGGTAGGTATCCATAGCGAGAAACTGGCTATCAGTTTCGCTGTTCTAGTTAGTGAAGCAGGTTCACCGATTAGGGTGGTGAAGAACTTGAGGGTATGTTCAGACTGTCATATGGCTATAAAGATTATATCAAAGTTAGAGGGAAGGGAGATAATTGTGAGGGATAATAACAGATTCCACTTCTTTAAGGATGGCATCTGCTCCTGCAAAGACTACTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258525.p1 GENE.S_Transcript_258525~~S_Transcript_258525.p1 ORF type:complete len:663 (+),score=116.31,PPR|PF01535.16|0.00069,PPR|PF01535.16|9e-07,PPR|PF01535.16|0.071,PPR|PF01535.16|2.8e-09,PPR|PF01535.16|0.15,PPR|PF01535.16|0.028,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|5.3e-08,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|0.00014,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|5.1,PPR|PF01535.16|0.033,PPR|PF01535.16|20,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|1.4e-12,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|3.3e-11,PPR_2|PF13041.2|0.0068,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|9e+02,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|3.8e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.004,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|4.1e+03,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|10,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|3.7e-05,PPR_1|PF12854.3|10,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|3.3e-06,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.011,DYW_deaminase|PF14432.2|3.2e-36,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1e+02,TPR_14|PF13428.2|5.2e+03,TPR_14|PF13428.2|6.6,TPR_14|PF13428.2|3,TPR_14|PF13428.2|7.1e+02,TPR_14|PF13428.2|1.6e+02,TPR_19|PF14559.2|4.4e+03,TPR_19|PF14559.2|4.3e+02,TPR_19|PF14559.2|0.24,TPR_19|PF14559.2|71,TPR_19|PF14559.2|1.3e+04,TPR_19|PF14559.2|3.6e+02,TPR_19|PF14559.2|3.4e+02 S_Transcript_258525:437-2425(+)
MYLCTQYWLNQQVNMVLQCMLMLSKWVLLVIVLFLMHAIMDMYSKHGLLEVARQVFDEMPERSIADWNCMISGYWRWGLEDEACELFDLMPERNVISWTCMVTGFSRMKDLKNARMYFDAIPEKSVVSWNAMLSGYAQNGFENEALKLFDEMLNAGVHPDERTWVTIISACSSSGDPCIAEGLLRKFDEKKVPVNLFIKTAIVDMYAKCGKLEDARNIFDGLRGRGNSAVWNAMISAYARIGDLTSARDLFDKMPDKDVVSWNSMIAGYAQNGQSPQAIELFKQMIKISHPKPDEVTMVSVLSACGHLGALELGNQIVNLLSKSEIKLSLAGCNSMIFMYSKCGSMKDAMRVFGEMDVRDVVSYNTLITGFAAQGNGIEAIALVSRMEEEGIKPDSLTFIGVLTACSHAGLVEEGHKVFESINYPSVDHYACMVDLLGRVGEVDKALQLVKRMPMEPHAGVYGSLLNASRIHKRVEVGELAASKLFELEPDNSGNYVLLSNIYAVAGRWKDVERTREAMKARGLSKATGWSLVEYGGKMHKFTAGDRSHEKSEEIYRILSELRLKMRQSGYFADKSCVLTDIEEEEKEEMVGIHSEKLAISFAVLVSEAGSPIRVVKNLRVCSDCHMAIKIISKLEGREIIVRDNNRFHFFKDGICSCKDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST