Transcript Information: S_Transcript_258685.p2


Annotated TAIR IDAT1G80000.1
Annotated Gene NameCASC3/Barentsz eIF4AIII binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30093195-30096742 | Forward length=605
E-Value1.5E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8996669868986
Replicate 27.5585482743338
Replicate 37.3429412184706
Condition 2: 8 Hour
Replicate 13.3567744017709
Replicate 25.1786686666034
Replicate 36.1184377384669
Condition 3: 24 Hour
Replicate 17.0793603904703
Replicate 29.0235546091013
Replicate 36.7725859976701


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258685.p2 GENE.S_Transcript_258685~~S_Transcript_258685.p2 ORF type:5prime_partial len:108 (-),score=47.68,Btz|PF09405.6|1.9e-17 S_Transcript_258685:34-357(-)
AGGGTAGAGAAGGACAAGGAGGGGCTGGAGAAAGAGAGAGGAAAGAAGAAAGGAGAGAAGAGAGAGAGTCAAGGGGAAGGTGAAGGTGAAGGAGGTGGTGAAGGTGCGGAAGAGAAGAAAGAGAATGAGCCGTTTGCCGTGCCGACTTCAGGTGCTTTTTATATGCATGATGATCGGTTTCGAGACAATGCTGCTGGTAGACACAGGAGGACATTTGGTGGTAGAAAATTATGGGAATCGAAGGATGAGAGGAAATGGGGCCATGACAAATTTGAGGAGATGAACATGCAGGAAAGGCATTATGAAGAGGGAAGGAGGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258685.p2 GENE.S_Transcript_258685~~S_Transcript_258685.p2 ORF type:5prime_partial len:108 (-),score=47.68,Btz|PF09405.6|1.9e-17 S_Transcript_258685:34-357(-)
RVEKDKEGLEKERGKKKGEKRESQGEGEGEGGGEGAEEKKENEPFAVPTSGAFYMHDDRFRDNAAGRHRRTFGGRKLWESKDERKWGHDKFEEMNMQERHYEEGRRW*

Click here to download the sequence:
Link to NCBI Protein BLAST