Transcript Information: S_Transcript_258995.p1


Annotated TAIR IDAT5G47690.3
Annotated Gene Namebinding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19317899-19327014 | Forward length=1607
E-Value7.7E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85848391081227
Replicate 21.3047886297455
Replicate 31.2890084359506
Condition 2: 8 Hour
Replicate 11.8344421778179
Replicate 22.1650176102961
Replicate 31.9482226305628
Condition 3: 24 Hour
Replicate 10.70467366098691
Replicate 21.3403329426872
Replicate 30.94921672492372


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_258995.p1 GENE.S_Transcript_258995~~S_Transcript_258995.p1 ORF type:5prime_partial len:186 (-),score=31.54 S_Transcript_258995:109-666(-)
TTGGACAAAGTTGAGATCAAAGCACTGGAGAAGATATTGGAACAGAAACAAAGGTTACAACAAGAAATGCAGAAGTATATGTCTCTTAAGCAGACATATAAGGATGCTGATTTATCTGAATACCAAAAAAAAGCTGTTCTTCTGTTCAGAGTAATGTCTAGGTTTTTTACGGATCCTACAAAGGCCGAGGAAGGATTTTTGGCTCTTGATCAATTAAAAGATGCTAATATCTGGAACATTTTGCTGGGTCTACTTGATCCAAATACTAGCTTTGATCAAGCTCATGCTAGTCAGGATGAGCTACTCAAGATTCTTGGTGAAAAGCATCGGCTCTTTGATTTCCTGAATGTTCTCTCTGTGAAATGTTCATACATGCTTTTCAGCAAGCTCAGTTTTATTGTAAGTTTGCAAAGTTTGTTAAGAAAATGTAATGTACCTAGCTTCATTTGCAATTTAATTACACTTTGTGCTTTTGTTGTTTCTATAATCATCTTTCATTATCAGAACTTATCAAATTCCATATTGGAACACAAAGCAACCAAAAATAAAGCCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_258995.p1 GENE.S_Transcript_258995~~S_Transcript_258995.p1 ORF type:5prime_partial len:186 (-),score=31.54 S_Transcript_258995:109-666(-)
LDKVEIKALEKILEQKQRLQQEMQKYMSLKQTYKDADLSEYQKKAVLLFRVMSRFFTDPTKAEEGFLALDQLKDANIWNILLGLLDPNTSFDQAHASQDELLKILGEKHRLFDFLNVLSVKCSYMLFSKLSFIVSLQSLLRKCNVPSFICNLITLCAFVVSIIIFHYQNLSNSILEHKATKNKAM*

Click here to download the sequence:
Link to NCBI Protein BLAST