Transcript Information: S_Transcript_259067.p1


Annotated TAIR IDAT5G40840.2
Annotated Gene NameRad21/Rec8-like family protein
Annotated Gene Symbol(s)SYN2
Annotation TypeOrtholog
Chromosome Positionchr5:16359611-16363722 | Reverse length=810
E-Value6.8E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4538199757766
Replicate 23.8074459637005
Replicate 33.7794821249906
Condition 2: 8 Hour
Replicate 16.4731924383285
Replicate 25.6188156059714
Replicate 36.2075426769514
Condition 3: 24 Hour
Replicate 12.9956773970152
Replicate 22.8286113061389
Replicate 33.6919787650016


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_259067.p1 GENE.S_Transcript_259067~~S_Transcript_259067.p1 ORF type:complete len:649 (+),score=155.66,Rad21_Rec8_N|PF04825.9|6.6e-24,Rad21_Rec8|PF04824.12|4.7e-09 S_Transcript_259067:217-2163(+)
ATGAGAACCACTCTTAAATCCCAAACCCAAACTTTGGGTCACAACCAATTTACTGGTTTCTTAAAGAGTGATAGAAAAGAAGAACAAGTAGAAGGAGAGAGAAAATCATTAGGAATGTTCTACTCACAATGGCTATTATCAAAGAACAGTCCATTAGCAGCCATCTGGGTTGCTGGTTGTTGCTTCAAACGCCTCAAGAAACGCCAAGTGACTGACACTCATATTCCTTCTTCTGTTGATAAAATTCTTCTCGAAGGATTGCCTTCTGTTACATATAGAATATTGGCTTATCTTCTTCTTGGAGTGGTGAGAATATATTCTAGAAAAGTAGAATATCTATACCAGGACTGCCATGAAACTGTCTCCGACATAAATAGACATGGTGTTGGAAAAAAGGTAGTCCCCTTTAAAGATCTTGTACGCTCTGCTAGCTCCATCATCCTGCCAGAGAGATATGAACTTGACGCTTTCCGACTGGAGTTTGCAGAAGGTGCATTTGGAGGCAATGTTAAACGAAAGGAAGACATTATTCTTCAAGATGCAACTGCAAGGGAAGATACATTTGAGCCGCACTCTTTTGACAAGAATCCATTTGATGAGGTCTGTCCTGACTGGGAGGAAAACTTAGATGCTCAGACATCAGCTTGGATCACTGTGCAGCCGGAAACTTGTTCTGTAACTCAGACACCTGAGAAAGTGGCTGCTGATAAGGAAACTTCTGCCAGTGCCTGCACTCCTCCCGACAAAGTCTTTTCTCCTCAAAGGATGGAAATTGAGATTGAGGAAAGGCCTTCAGACAGAAAGAAAAACGTTCAAACTAGCAAGGAGAAGCTTCGAGAGTTGAGGTTCACACAAGAAGAGTGCATGAATGATATTATCCGTGGATTGGATGTGGAGCTTCTCAATCTTATCAATGAATATCAAGTAGAAAAAGTTGATGATGGCGGTAGGAATTATTTAGAGAAGGAAGAATTACAAAATCATGACCATGCTGTATTGGCAGACAAGGAATTACCTTTCCCCATGGAGAAGCCTCCTAATATAGATGTCCCAGATGATACAGGTGGCACTAACATAGAGTTTCTAGCAGTATCTACTCCAGCTAAGAGGGAGAGTATCAAAAGACTCAAAAAAAGAAAATGCATTCTTGATGAGAATTTGTTGCTGAATAATCAGACAATGAAGCAGACCATCAATGACGCCAGTGACTTGGTATGCAAGAGAAGGAAGGCTCCTCATACTGTCATTGATATATGGAGATTTTCTCTCATTCCCAACCTTTCCAAGAATTTCTCTCAGCCTCTAATACCTTGTGCTGCCGCTGCACTGGAGCAGCTACACGTCCAGTGTATAAAGAGGACCGAAAGAGCCAAAGCATCTTCAAGTGCCGCAGCTGGCCTAGCAGAAACTACTGAAGCTCCTGTTAAACATCAAGGTGCAATTTCACCAAGGACCCCGGCTGATAGCAGGTCAACAACAATTGCGCCAGGAACACCAGTACGTGCTCCAACATCAGCAAGAGTTTTTGGAGATCCCAGGACTGTGGATTCGGATGGGGAAGGCCCTGTTCACATGCATGAAAATATGAGGAAGGAGTTGTCTATACATGAGGAACAAGATCGCGATCCTAATCTGATGGATGAGGTGGAAGCAAATGAAGGCGACAGCCAAGAACTCCATAAGAGCAAGGAGGGACTGTCTGCTAGAACCAGAACGGTGGCCAGATACCTGCATCAAGTAATCCACAAGAAGCGGCAGCAAGGGGAGAAAGCTGTGACTTTGCTTCCCATTTTTGAACGTAAAACAAAGGCCGAAAATGCACGATTGTTTTTTGAATTACTGGTCTTGACTTCTGGAGGATTCATGAAAGTGAAGCAAGAGAGAGCTTATGATGATGTGCTTCTGCAAGAAACGTCGAAGATGGAAACAACCTTAGCAAGCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_259067.p1 GENE.S_Transcript_259067~~S_Transcript_259067.p1 ORF type:complete len:649 (+),score=155.66,Rad21_Rec8_N|PF04825.9|6.6e-24,Rad21_Rec8|PF04824.12|4.7e-09 S_Transcript_259067:217-2163(+)
MRTTLKSQTQTLGHNQFTGFLKSDRKEEQVEGERKSLGMFYSQWLLSKNSPLAAIWVAGCCFKRLKKRQVTDTHIPSSVDKILLEGLPSVTYRILAYLLLGVVRIYSRKVEYLYQDCHETVSDINRHGVGKKVVPFKDLVRSASSIILPERYELDAFRLEFAEGAFGGNVKRKEDIILQDATAREDTFEPHSFDKNPFDEVCPDWEENLDAQTSAWITVQPETCSVTQTPEKVAADKETSASACTPPDKVFSPQRMEIEIEERPSDRKKNVQTSKEKLRELRFTQEECMNDIIRGLDVELLNLINEYQVEKVDDGGRNYLEKEELQNHDHAVLADKELPFPMEKPPNIDVPDDTGGTNIEFLAVSTPAKRESIKRLKKRKCILDENLLLNNQTMKQTINDASDLVCKRRKAPHTVIDIWRFSLIPNLSKNFSQPLIPCAAAALEQLHVQCIKRTERAKASSSAAAGLAETTEAPVKHQGAISPRTPADSRSTTIAPGTPVRAPTSARVFGDPRTVDSDGEGPVHMHENMRKELSIHEEQDRDPNLMDEVEANEGDSQELHKSKEGLSARTRTVARYLHQVIHKKRQQGEKAVTLLPIFERKTKAENARLFFELLVLTSGGFMKVKQERAYDDVLLQETSKMETTLASC*

Click here to download the sequence:
Link to NCBI Protein BLAST