Transcript Information: S_Transcript_259205.p2


Annotated TAIR IDAT2G44600.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60200.1); Has 56 Blast hits to 55 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18408845-18409786 | Forward length=313
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0235769705839
Replicate 21.6971376582704
Replicate 31.0640040048231
Condition 2: 8 Hour
Replicate 11.6404146397795
Replicate 22.5813671507377
Replicate 32.6644809506227
Condition 3: 24 Hour
Replicate 12.1004695664033
Replicate 20.43584253031437
Replicate 32.1826769196735


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_259205.p2 GENE.S_Transcript_259205~~S_Transcript_259205.p2 ORF type:5prime_partial len:104 (+),score=5.91 S_Transcript_259205:2-313(+)
TCCTTTTTCCCTTCCTATGATATAAAGAAGCTCAAAAACACACAGAAAAAACGACAAACCAAAGCCGCCACCACACACAAACACACACTCAACTTTACCGTAACCTCTCTTCAACATTTCTCCATCACCCAGATCCCCACCCTCACTCTTCAAAATGTCAACCCAAATTTCCCCCTCCTTCTTTTAAACCCCAGATCTCAGTTCTCAATTCTCAAACCCACATACCCAGAAATTAAAATTAAAAATGAGGTGCAAGAAGCATTTCGCCGATCACAGCAGCACAGTGGGTATCTGCGCCACGTGTCTCCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_259205.p2 GENE.S_Transcript_259205~~S_Transcript_259205.p2 ORF type:5prime_partial len:104 (+),score=5.91 S_Transcript_259205:2-313(+)
SFFPSYDIKKLKNTQKKRQTKAATTHKHTLNFTVTSLQHFSITQIPTLTLQNVNPNFPLLLLNPRSQFSILKPTYPEIKIKNEVQEAFRRSQQHSGYLRHVSP*

Click here to download the sequence:
Link to NCBI Protein BLAST