Transcript Information: S_Transcript_25931.p1


Annotated TAIR IDAT2G39220.1
Annotated Gene NamePATATIN-like protein 6
Annotated Gene Symbol(s)PLP6, PLA IIB
Annotation TypeOrtholog
Chromosome Positionchr2:16375055-16376663 | Reverse length=499
E-Value5.6E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.124616295262
Replicate 227.053737723802
Replicate 323.940465021841
Condition 2: 8 Hour
Replicate 18.3407974813311
Replicate 27.2838576966552
Replicate 310.500195543257
Condition 3: 24 Hour
Replicate 121.059760828141
Replicate 218.495203527421
Replicate 322.609189910717


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_25931.p1 GENE.S_Transcript_25931~~S_Transcript_25931.p1 ORF type:complete len:473 (+),score=37.92,Patatin|PF01734.18|2.9e-19 S_Transcript_25931:552-1970(+)
ATGGCGATGGCGCGTAGTCCGTCATCAGAAATGCAAGAACCAAGTATAGACACAGACAAGCTAAGCTACGAGATATTTTCAATACTGGAGAGCAAATTTTTATTCGGCTATGGTGACACCCAAAACAACAGTAACAGTAAACTAAGCTGGATTCCGAAACAAATATCTCCGACGGTTGAATTCTCACCGGAAGAACTGGCTACTACGGTTCCTCCCAGCTCGATCAAGAACCAGAGAGGGAAGATATGTATTCTGAGTATCGATGGTGGAGGAATGAGGAATATCATCTCTGGTAAGGCTTTGGCTTACTTGGAGCAGGCGTTAAAAGTCAAGTCCGGTAATCCTGACGCCGGAATCGCTGATTACTTTGATGTAGCTGCCGGCGCCGGCGTCGGGGGGATTTTCACGTCGATGTTGTTTGCCACGAAGGATCAGAGCCGTCCGTTGTACAAGGCGGACGATACGTGGCGGTTTCTGGCTGAGCAGGGGAGTAAGATTTACCGGTCGGGTTCGTCCGGTTCGGTTCTGAAGAGGATATTGAAGAAGAAGGGAGGAGCCAGTGGTGGTGGTGGGTCGACCGGGGCGGCCACGGCTGGGTTGGAGAAGTTGCTGAGAGAGAAATTTACGAAAAAAACCGGTGGAAGTTTGACTCTCAAAGACACGTTGAAGCCGGTTTTAATTCCGTGCTACGACTTGTCCAGTACGGCACCGTTTCTATTCTCACGCGCTGACGCGCTCGAGACGGACGGGTTCGATTTCCCGCTCTGGGAAGTTTGTCGTGCCACGTCAGCTGAACCAGGTGTTTTCGAGCCGCTCTGCATGCGGTCCGTCGACGGTTCAACCCGGTGCGTCGCGGTTGACGGTGGTCTAGCGATGGCAAACCCAACAGCTGCGGCTATTACGCACGTGCTCCACAACAAGCAGGAATTCCCGTTCGTGCGAGGGGTTGAGGACATTTTGGTACTTTCAATAGGTACAGGGCAGCTTCTAGAAGGGAGTTATGATCACCAAGAGGTCAAGGGTTGGAAGTCCAAGCAATGGGCTCGTCCAATGGCTCGCATTGCTGGTGATGGCTACACCGATATGGTGGACCACGCCATCGCCATGGCTTTTGGGCAGTGCCGTAGCAGTAACTATGTTCGCGTTCAGGCAAATGGGTCAAGCTTTGGACGGTGCGGACCAAACGTTGATACAGATCCAAGTCCTGGTAATGTGAAGATACTGGTAGGAATAGGGGAGGAAATGCTGAAACAAAAAAATGTTGAATCTGTGCTCTTTGGAGGCAAGAGAATCAGTGAGCAGAGCAACTTTGAGAAGCTGGATTGGTTTGCGGAACAGCTTGTATTGGAGCATCAGAGGCGGAGTTGCAGAATAGCTCCCACTGTTGCATTCAAGCAAGCTACCATAAGACCAACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_25931.p1 GENE.S_Transcript_25931~~S_Transcript_25931.p1 ORF type:complete len:473 (+),score=37.92,Patatin|PF01734.18|2.9e-19 S_Transcript_25931:552-1970(+)
MAMARSPSSEMQEPSIDTDKLSYEIFSILESKFLFGYGDTQNNSNSKLSWIPKQISPTVEFSPEELATTVPPSSIKNQRGKICILSIDGGGMRNIISGKALAYLEQALKVKSGNPDAGIADYFDVAAGAGVGGIFTSMLFATKDQSRPLYKADDTWRFLAEQGSKIYRSGSSGSVLKRILKKKGGASGGGGSTGAATAGLEKLLREKFTKKTGGSLTLKDTLKPVLIPCYDLSSTAPFLFSRADALETDGFDFPLWEVCRATSAEPGVFEPLCMRSVDGSTRCVAVDGGLAMANPTAAAITHVLHNKQEFPFVRGVEDILVLSIGTGQLLEGSYDHQEVKGWKSKQWARPMARIAGDGYTDMVDHAIAMAFGQCRSSNYVRVQANGSSFGRCGPNVDTDPSPGNVKILVGIGEEMLKQKNVESVLFGGKRISEQSNFEKLDWFAEQLVLEHQRRSCRIAPTVAFKQATIRPT*

Click here to download the sequence:
Link to NCBI Protein BLAST