Transcript Information: S_Transcript_259388.p1


Annotated TAIR IDAT5G02220.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:441884-442102 | Reverse length=72
E-Value3.3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6865662552519
Replicate 23.1914727032883
Replicate 32.2038489659649
Condition 2: 8 Hour
Replicate 11.2070975651207
Replicate 21.8291448573361
Replicate 31.6087432154703
Condition 3: 24 Hour
Replicate 10.27477840868672
Replicate 20.99777786814108
Replicate 30.31725842019014


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_259388.p1 GENE.S_Transcript_259388~~S_Transcript_259388.p1 ORF type:5prime_partial len:159 (+),score=6.25 S_Transcript_259388:1-477(+)
GGCCACTCCAGCTTCCCAAACAAGCCGCAACCACACCCACACCACGCAAAACTTACAAACTATTTTTTCCCTCCATTTTTCCACCCTTCCTATTTATATACCAAAAACTACACTTTCTCTTCATTTTTATTACTAATATATAGCTCTGTCTCTACATTTTACACATACTTTAGTCTACAAATATACTTCACATTAACCTATATACTCATTTTTGTTGCTTTGCTGCTGCTGAGTGCTGTGCTGGGCATGGAGGGGAAGGAAAATAGTCGGGTCGAGTTTGAGTCGGGTTGTTGTACACCGAGGCACGGTGGTATTCCGGCAACATTGGTGTGCCCTCCAGCTCCAAGGAAGAGAAGGGTTTATGCAAATCCAGCCGTTGATCCCCCAAAAGGCGGGTATTTTCAGCCACCGGATCTGGAGTCAATCTTCACCCCTTTGCCTGTTAAGCAGGGGAAGCTTGTGGAGTATAATTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_259388.p1 GENE.S_Transcript_259388~~S_Transcript_259388.p1 ORF type:5prime_partial len:159 (+),score=6.25 S_Transcript_259388:1-477(+)
GHSSFPNKPQPHPHHAKLTNYFFPPFFHPSYLYTKNYTFSSFLLLIYSSVSTFYTYFSLQIYFTLTYILIFVALLLLSAVLGMEGKENSRVEFESGCCTPRHGGIPATLVCPPAPRKRRVYANPAVDPPKGGYFQPPDLESIFTPLPVKQGKLVEYNY*

Click here to download the sequence:
Link to NCBI Protein BLAST