Transcript Information: S_Transcript_259496.p1


Annotated TAIR IDAT2G45380.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18699588-18703093 | Reverse length=494
E-Value4.5E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8591153940639
Replicate 25.3297750054671
Replicate 34.4034622671518
Condition 2: 8 Hour
Replicate 14.8521253249656
Replicate 26.4099116889104
Replicate 35.6283417833378
Condition 3: 24 Hour
Replicate 16.4430133890797
Replicate 25.4113033258133
Replicate 34.8885423144748


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_259496.p1 GENE.S_Transcript_259496~~S_Transcript_259496.p1 ORF type:5prime_partial len:356 (+),score=78.66,Mlf1IP|PF10248.5|3.8e-13 S_Transcript_259496:2-1069(+)
TTCTCTCTCTCTTATCTCATCCGTCTTCCCCCGAGACGTCTACATAAAAAGGAGTATTCCTCATTTTTTAAATTAACGACAACAAGGTATGCAGGAATTCTAGATCTTTCCTTCTCTTTCCGGAAGCATCTCTCATTGCTGTGCATTCCCGTCAACAATTTCAGGGTGACGATGAAAAACGAGAGAGAAGGCAGAGACGCAAGGGACCCATTTGACATGTTTGGTGGTGCTGGAAATTTTGGAGGTTTTGGTGGCTCCATTTTTGGGAGGAATCCCTTTGATGATCCATTTTTCACAAATCCATTGAGCAGCACGTTTGACCAAAGAAATCTTATGCGTGATTCATTCCCAGTTATTCCACCAAGTGGACCTACTATTCGAGAACTGACTTCTGATGATGAGGATGACGGCAATGATCATGGAAGAAATGAAGAGGAAAATAAAGAGGGAAAGGGTCAGAAGGGTGCAACACATAAAAATCAGCCAATCATTGATCACCCTGATGATGAAACTGATGGTTCAGCAGGTGATAGTGAACATGTGAACTCCAGGACAGATTACAACAGGCCTCAGGGCACACAGGCTCAAACATTTAAAGTTCACAGTTGCAAAGTCACATATGGTGGTATCGATGGAGTGTATTACTCGTCTTCAGCAACAAGGAAGATGGGTAGTGATGGGGTGATCATGGAAGAGTGCAAAGAAGCTGATAAGGCAAAATGTGAAGCAACACATAGGATTTCAAGGGGACTTCATGATAAGGGTCATTCTTTGACAAGGAAGCTAAATCCAGATGGTAAAGTGGAGACAATGCAAACACTGCATAATCTGAATGAAGATGAAATTGGAAGTTTTGAAGAGGCCTGGAAAGGCAACACAGGAATCCATCTTCCACCTTCAACAGGAACACGCAGTGATCAAGCCGATAAGATGTCGGACAGGGGAGGATCGCTTCTTCCATCCATCAGGCACATGGGAGATCCTTGGGGGAGGGTACCTAACAACGAAAGTAGGACTGATCCTTCAGGTGGCAGAACCAAAAAGGTCGTCAGAATCCCTATTGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_259496.p1 GENE.S_Transcript_259496~~S_Transcript_259496.p1 ORF type:5prime_partial len:356 (+),score=78.66,Mlf1IP|PF10248.5|3.8e-13 S_Transcript_259496:2-1069(+)
FSLSYLIRLPPRRLHKKEYSSFFKLTTTRYAGILDLSFSFRKHLSLLCIPVNNFRVTMKNEREGRDARDPFDMFGGAGNFGGFGGSIFGRNPFDDPFFTNPLSSTFDQRNLMRDSFPVIPPSGPTIRELTSDDEDDGNDHGRNEEENKEGKGQKGATHKNQPIIDHPDDETDGSAGDSEHVNSRTDYNRPQGTQAQTFKVHSCKVTYGGIDGVYYSSSATRKMGSDGVIMEECKEADKAKCEATHRISRGLHDKGHSLTRKLNPDGKVETMQTLHNLNEDEIGSFEEAWKGNTGIHLPPSTGTRSDQADKMSDRGGSLLPSIRHMGDPWGRVPNNESRTDPSGGRTKKVVRIPIE*

Click here to download the sequence:
Link to NCBI Protein BLAST