Transcript Information: S_Transcript_259627.p1


Annotated TAIR IDAT3G53540.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in 206 species: Archae - 2; Bacteria - 409; Metazoa - 304; Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19846805-19850670 | Reverse length=924
E-Value1E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2716109805206
Replicate 20.82829585369509
Replicate 31.0700563597993
Condition 2: 8 Hour
Replicate 12.0379212589752
Replicate 21.5270886443499
Replicate 31.6005073287017
Condition 3: 24 Hour
Replicate 11.1183387452523
Replicate 21.0055616057765
Replicate 30.60257443971267


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_259627.p1 GENE.S_Transcript_259627~~S_Transcript_259627.p1 ORF type:internal len:293 (+),score=69.63,DUF3741|PF12552.4|1.7e-20,DUF3741|PF12552.4|1e+03,VARLMGL|PF14383.2|1.7e-07 S_Transcript_259627:3-878(+)
CAAATGGAGAATTCTCGGCGAAGAAGGTCGCATGCTAGGGTTTCTTCACCGGTCAAGGTCACAACCCCCTCCCACCTGAAAGAAGCTGGAAAACAAACTAGTTCATCACTATTGCGGTTCGATTCCAGTTCTTCTAGTAGTGTTGCAACCGTAGAGGTTGATCGGCTTACACTTGACAGGGGAAGGAATTCAACGTTGCCAACTGGCACCCCAATGAAGAAGTTATTGGCAGATGAGATATCAAAGGATAGTGAATCCAAAAGGCGATCGCCTAGCATTATTGCTAGACTGATGGGTCTTGATGGGTTTCCTACTCAGCATAGTAGTAACAAACAATATAAGAGACTTGGTGAAGAATATCAAGGGAATGGTGTATTTCGCAAGGCTGGTGGACTTAACAACTGTCGAAAGACTGCAAAGTGGCAGCAAGAATTTAAAGATGTTTATGAAGTTGCTGAGAGTTTGAACACGGAATCTTGGGGCAACAAATCATCTTCAGCTTCCAATTTGAATCTCAGTGACGATGAGATTGCCTTCATAAGGCAAAAATTCATGGATATGAAACGCTTTTCTACTGATGAAAAGCTTCATCATTCAAAGGAGTACCATGATGCACTTGAGGTGCTTTATTCTAACAAAGATATTCTGCTGAAGTTTCTCCATGAATCTGATCCACTGTTCTTGAAGCATCTTCATGATTTGCGGCATGCTCATGAATCTCATGGCAGGCATGGTCTAAGGATGAAATCCAGAAACATTTTGAAGTGCAATATTGATGCCATAGGGTGGCACTCTGGGGGTGAAGCTTCTCAGAAGATAGATATTAGCCATTCTCATAAATATTGGGATAGTGGTCATTCTCATAAATTAGATTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_259627.p1 GENE.S_Transcript_259627~~S_Transcript_259627.p1 ORF type:internal len:293 (+),score=69.63,DUF3741|PF12552.4|1.7e-20,DUF3741|PF12552.4|1e+03,VARLMGL|PF14383.2|1.7e-07 S_Transcript_259627:3-878(+)
QMENSRRRRSHARVSSPVKVTTPSHLKEAGKQTSSSLLRFDSSSSSSVATVEVDRLTLDRGRNSTLPTGTPMKKLLADEISKDSESKRRSPSIIARLMGLDGFPTQHSSNKQYKRLGEEYQGNGVFRKAGGLNNCRKTAKWQQEFKDVYEVAESLNTESWGNKSSSASNLNLSDDEIAFIRQKFMDMKRFSTDEKLHHSKEYHDALEVLYSNKDILLKFLHESDPLFLKHLHDLRHAHESHGRHGLRMKSRNILKCNIDAIGWHSGGEASQKIDISHSHKYWDSGHSHKLDS

Click here to download the sequence:
Link to NCBI Protein BLAST