Transcript Information: S_Transcript_25968.p1


Annotated TAIR IDAT4G00990.1
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:427035-431535 | Forward length=840
E-Value8.5E-243
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.216209510975
Replicate 24.3750042271497
Replicate 33.4531080326741
Condition 2: 8 Hour
Replicate 17.8404839293629
Replicate 28.7202610016977
Replicate 310.739558963531
Condition 3: 24 Hour
Replicate 13.9971488940236
Replicate 27.2331313541534
Replicate 35.344926856914


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_25968.p1 GENE.S_Transcript_25968~~S_Transcript_25968.p1 ORF type:complete len:1175 (+),score=316.90,JmjC|PF02373.18|7.7e+03,JmjC|PF02373.18|4.9e+03,JmjC|PF02373.18|4.6e-17,zf-4CXXC_R1|PF10497.5|4.4e-06,zf-4CXXC_R1|PF10497.5|1.7e+02,zf-4CXXC_R1|PF10497.5|6e+03,zf-4CXXC_R1|PF10497.5|1.5e+04 S_Transcript_25968:368-3892(+)
ATGGATGATGCAAATGATGTGATTATTTTGCCAAAGAAGAGAGGGAGACCAAAGGGTTCCAAAAACAAGCCAAAATTGAGTCATGTTGGCGGTGCAGAGGTCTGTGGTGATGGTTTGAATGATGTGACTATCATGGAGATTGGGAAGGAAGAGGACGTAGTGGCAGTAGGGTTTAAGGATGATGTAATCGGAGAAGGGGTTGGGAAGCAACATAGCAGCACTCCTAAGGGTTTAAGGTGCAGAAAGAAGGAAGTTATCTCAACTGCTCCTAAGGTTGAGGAGGAAGTTGTGAAGAAAGTGGAGAGGCGTGGCCGCAGGCCTAAGGGTTCAAAGAAGAAAAATGATGGGATTGTAGAGATTGAGATTAAGGGTGACTATGATGAAATGGTGAACGTGAAGAAACGTGGCCATTCCAAGGGTTCAAACAGTAGTACAAAAGATGTCATTTTGATTACTGAGGATGGAGAAGAGTTGGGGAAGAAGGTAGAGAGGCGCGGAGAGCCTATGGGTTCTAAGAAAAAAAAGGGTTTGAGTGGGGGTGTCACCACTAAATTCAAAGCACTGAAAGGTTGTAAGAAAAAGATGATGAAATGTGGTACAGCAGAGGGTGTTTCAGCAGTAGTTCCTGAGCCAATGAGTGAGATGGGTAGTGAAGTGGTACAGGTTGCGTATGGTGAAGCTCCCTGCAAGGATGATCCTGAAGAGCTCGAGTCTTCAAAAGACGCTTCGACTGTTGAACCTATGAGTATGAGTGATCCTAGTGTTGGTGGGAATAACAAAGTTAGAGCTAGGTTCCCTAGGAAAAGAAAGCGTGGGCGGCCTAAGGGCTCCAAAAACGAAAGGATAATCGTGGTTAGTGAAATCTTTGACGACATTGTGGGTTCACAGTATGGGGAACAGAACTTGGTTGTGCAGAAGGATATGAGATGCCTGGTGGAAATTCCTGGGCGTTCTGGGAAGAAGCGAGCTGATGCCGGCAATACATTACATGGATCAAAAAACCCAGAGAGACCTAGGAGAAAGGTGGCTAGCTATCAGAAGGCTAATGACATGCAAGAGGGTGTCAATGGGGAGAAGGAACAAAGTTCAATGTGTCACCAGTGCCTCAGGTGCGATAAAAATGGTGTTATTTCTTGCTCGTACTGCAAAAGGAAACGTTATTGTCAGCCCTGCCTCGTGAAGTGGTATCCTGAAAGAACAAGAAAAGAAGTGCAGGAGGCATGTCCATTCTGCCGTGGGATTTGTAATTGCAAAACATGCCTCCAGAAGAACCTAGTTTTGAAGGTTAGACAGAAAGAAGTTCATAGAAAGATGAAAGGACAGAGAATCCTCTACTTGTTGTGCAAAATTAATCCCCTTGTGAGGCAGATACAACAAGAGCAGAGAACTGAGCTACATATGGAAGCTAGAATACAAGGCAAAACAATTAAAGAGGAGGATGTAATGAGGACAAGACTGGATCATGATGACCGGATATACTGTGATAATTGCAATACATCCATTGTAAATTTTCACCGAAGCTGCCCAAGTTCTGTTTGTTCTTATGATCTCTGCCTATCTTGCTGTCGAGAACTAAGAGAAGGTTTGAGGCCTGGTGGCAACTCTTCCTCTCAGCTGACTGTACAAGGTCCCTCAAATCAGACTACAAAGACCCAGATTCCTGGTGATGATACAGTTGAGTGGAAAATAAATATGGATGGTAGCATTCCTTGTCCTCCAGAGGCATGGGGTGGTTGTGGTCTTCACATGCTTGAACTTAGACGCATCTTTGAACCTAACTGGGTAGACGGCCTGACAAAAAGGATGGATGAGGTCATTGCTGATTATCATTTACCAGAGCTAGACTCTACTCGAGGCTGTCCTGTTTGCCTCCACATATTATCTTCAGCTGATGAAAGAAGAGAATTTGATTCAGCTGATGAAAGAAGAGAATCTGATTCAAGAAAGGCATCTTCAAGGGAGCTGACGCATGATAATTTTCTTTACAGTCCAAGTGCTATGAATCTGACCAAAGACCAAATGGACCATTTCCAAATGCATTGGATGCGTGGTGAACCTGTTGTTGTTAGAGATGTACTTGCAAAAGCGTCTGGACTTAGTTGGGAGCCAATGGTCATGTGCAGGGCTTTTAGGGGAGCCAAAAAAATCATGAAGGAGGATACACTTAATGTGAAGGCCATTGATTGTTTGGATTGGTGTGAGGTAGAGATTGATATATATAATTTCTTCAAGGGTTACTTGCAAGGTCGAAGGCATAGTAATGGGTGGCCAGAGATTCTAAAACTCAAGGATTGGCCTGCTTCAAATACATTTCAAGAATGCTTGCCAAGGCATGGTTGTGAGTTTATAATGATGCTTCCTTATAGTGATTATACTCATCCTGAATCTGGTATTCTCAATCTCGCTTCAAAGCTCCCTAATACAACTCCAAAGCCAGATTTGGGACCAAAAACATACATTGCTTATGGTTTCATGGAAGAGCTTGGCAGGGGTGATTCAGTTACGAAATTGCACTGTGACATATCTGATGCGGTAAATGTGCTAGTGCACATGACAAAGGTTGAAATTGGATCATCGGAGAACAAGATCATAAATAACTTGCAAAAAGATTATGAAGCTGAAGATGCTTTTGCGGTGCACAGATGTATGAATCTAAATGAAAACTGTGACACTGGCTTGACCTGTTCTGCTGGTGAAGAGTTTTCCTGTGCTGGTGGAGCTGATAATTTGAAAAATGTTGGTCATTCTTTGGAGTTTCTGAATCCTTGTGGAGTTGAAAATTTAGCCCCTAAGATACTTGGTTCAGATGGGACAGAAGTCTACCCATTTGAAAACTGTGACACTGACTTGGCCTGTTCTGCTGCTGAAGACATTCTTTGTGCCGGTGGAGCTGATACTGTAAATAAAGGTGGACATTCTTTGGAATATCTGGAATCTTCTGGAGTTGAGAATTCAGCCCCCGAGAAACTTGAATCAAATGGAACTAAGGTTTATGGAGGTGCTGTCTGGGATGTTTTCCGCAGGAAAGATGTTCCCAAAATAGTTGAATATCTGAAGAAGCATCAGCAAGAATTTCGCCACATCAACAACCTTCCTGTGAAATCTGCCATTCATCCCATTCATGATCAGACGTTTTATCTGACTGAAAGTCATAAGAAACAGCTGAAGGAAGAGTTTGGTGTACAACCTTGGACATTTGAACAACACCTGGGTGAGGCTGTTTTCATTCCTGCTGGATGTCCGCATCAAGTGAGAAATAGACAATCTTGCATCAAAGTGGCGCTTGACTTCGTATCCCCTGAGAATATAGAGGAATGCATTCGGCTGACTGAGGAGTTCCGCCTGCTCCCAAAAAACCATAGATCTAAGGAGGACAAATTGGAGGTGAAGAAGATGGCGCTATATGCTGCAAGCGCTGCTCTGAATGAAGCCAGAGAGCTGATGTCAGATCTCGAGCAAGGCTTCACTGAAGTAGTTGCGAGCCCAAACAATGGGCAAGCTGCTGTACTGGCTGATCCACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_25968.p1 GENE.S_Transcript_25968~~S_Transcript_25968.p1 ORF type:complete len:1175 (+),score=316.90,JmjC|PF02373.18|7.7e+03,JmjC|PF02373.18|4.9e+03,JmjC|PF02373.18|4.6e-17,zf-4CXXC_R1|PF10497.5|4.4e-06,zf-4CXXC_R1|PF10497.5|1.7e+02,zf-4CXXC_R1|PF10497.5|6e+03,zf-4CXXC_R1|PF10497.5|1.5e+04 S_Transcript_25968:368-3892(+)
MDDANDVIILPKKRGRPKGSKNKPKLSHVGGAEVCGDGLNDVTIMEIGKEEDVVAVGFKDDVIGEGVGKQHSSTPKGLRCRKKEVISTAPKVEEEVVKKVERRGRRPKGSKKKNDGIVEIEIKGDYDEMVNVKKRGHSKGSNSSTKDVILITEDGEELGKKVERRGEPMGSKKKKGLSGGVTTKFKALKGCKKKMMKCGTAEGVSAVVPEPMSEMGSEVVQVAYGEAPCKDDPEELESSKDASTVEPMSMSDPSVGGNNKVRARFPRKRKRGRPKGSKNERIIVVSEIFDDIVGSQYGEQNLVVQKDMRCLVEIPGRSGKKRADAGNTLHGSKNPERPRRKVASYQKANDMQEGVNGEKEQSSMCHQCLRCDKNGVISCSYCKRKRYCQPCLVKWYPERTRKEVQEACPFCRGICNCKTCLQKNLVLKVRQKEVHRKMKGQRILYLLCKINPLVRQIQQEQRTELHMEARIQGKTIKEEDVMRTRLDHDDRIYCDNCNTSIVNFHRSCPSSVCSYDLCLSCCRELREGLRPGGNSSSQLTVQGPSNQTTKTQIPGDDTVEWKINMDGSIPCPPEAWGGCGLHMLELRRIFEPNWVDGLTKRMDEVIADYHLPELDSTRGCPVCLHILSSADERREFDSADERRESDSRKASSRELTHDNFLYSPSAMNLTKDQMDHFQMHWMRGEPVVVRDVLAKASGLSWEPMVMCRAFRGAKKIMKEDTLNVKAIDCLDWCEVEIDIYNFFKGYLQGRRHSNGWPEILKLKDWPASNTFQECLPRHGCEFIMMLPYSDYTHPESGILNLASKLPNTTPKPDLGPKTYIAYGFMEELGRGDSVTKLHCDISDAVNVLVHMTKVEIGSSENKIINNLQKDYEAEDAFAVHRCMNLNENCDTGLTCSAGEEFSCAGGADNLKNVGHSLEFLNPCGVENLAPKILGSDGTEVYPFENCDTDLACSAAEDILCAGGADTVNKGGHSLEYLESSGVENSAPEKLESNGTKVYGGAVWDVFRRKDVPKIVEYLKKHQQEFRHINNLPVKSAIHPIHDQTFYLTESHKKQLKEEFGVQPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENIEECIRLTEEFRLLPKNHRSKEDKLEVKKMALYAASAALNEARELMSDLEQGFTEVVASPNNGQAAVLADPL*

Click here to download the sequence:
Link to NCBI Protein BLAST