Transcript Information: S_Transcript_259949.p2


Annotated TAIR IDAT3G17900.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6128983-6133069 | Forward length=838
E-Value7E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65711114160939
Replicate 20
Replicate 30.22768809979754
Condition 2: 8 Hour
Replicate 10.78982927100493
Replicate 20.27619566221885
Replicate 30.52631722481435
Condition 3: 24 Hour
Replicate 10.53937983927393
Replicate 20
Replicate 30.31138326426069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_259949.p2 GENE.S_Transcript_259949~~S_Transcript_259949.p2 ORF type:5prime_partial len:81 (+),score=6.31 S_Transcript_259949:2-244(+)
CTGCTGCCACTGACAGACGGCATAATTGCGCTTGACACTTTGCAGATATATGTTAAGGAGAAAGGTAAATACGCTCGCTGTCCCAAAATTTTCTTCATGTTTTTGTATGTAGGTTCTGCCAAAATTTTGTTCATTTTTGTATTTTTGGCAATTTTGGAGTTAAAAGACTACTTTACTAAATCCTACCAAGGCCACCACCAGTCCACCACCCCTACCCCAGAACTGAAGCCATGTTTGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_259949.p2 GENE.S_Transcript_259949~~S_Transcript_259949.p2 ORF type:5prime_partial len:81 (+),score=6.31 S_Transcript_259949:2-244(+)
LLPLTDGIIALDTLQIYVKEKGKYARCPKIFFMFLYVGSAKILFIFVFLAILELKDYFTKSYQGHHQSTTPTPELKPCLY*

Click here to download the sequence:
Link to NCBI Protein BLAST