Transcript Information: S_Transcript_260128.p1


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeOrtholog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value1.3E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1209.9967072255
Replicate 2226.18994336276
Replicate 3247.19465591044
Condition 2: 8 Hour
Replicate 174.190853708345
Replicate 267.49154337531
Replicate 380.785271175181
Condition 3: 24 Hour
Replicate 1245.80083188156
Replicate 2277.29840046354
Replicate 3261.33429202948


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_260128.p1 GENE.S_Transcript_260128~~S_Transcript_260128.p1 ORF type:internal len:119 (+),score=30.06,Chloroa_b-bind|PF00504.17|5.6e-22 S_Transcript_260128:1-354(+)
GCTGCTCCACTCCCAAAGGCTAAGCCAGCAGCTGTTGTCCCTGTTGATGAGGAGCTTGATAAATGGTATGGCCCTGCCCGTAGGATCTTCTTGCCCGAAGGCCTTTTGGACCGCTCCGAGATCCCTGAGTACCTCAACGGAGAAGTCCCCGGAGACTACGGTTATGATCCTTTTGGTCTGAGCAAGAAGCCAGAGAACTTGGCCAAGTATCGTGCATATGAGCTGATCCACGCCCGGTGGGCTATGCTTGGAGCAGCTGGGTTCATCATCCCAGAGGCTTTCAACAAATTCGGTGCTAACTGTGGCCCTGAAGCTGTTTGGTTCAAGACTGGTGCCCTGCTCTTGGATGGAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_260128.p1 GENE.S_Transcript_260128~~S_Transcript_260128.p1 ORF type:internal len:119 (+),score=30.06,Chloroa_b-bind|PF00504.17|5.6e-22 S_Transcript_260128:1-354(+)
AAPLPKAKPAAVVPVDEELDKWYGPARRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPENLAKYRAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGN

Click here to download the sequence:
Link to NCBI Protein BLAST