Transcript Information: S_Transcript_260131.p1


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeOrtholog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value8E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6227439777549
Replicate 21.0762336369519
Replicate 30
Condition 2: 8 Hour
Replicate 11.300328677874
Replicate 20.27282742243569
Replicate 30
Condition 3: 24 Hour
Replicate 11.3320050908899
Replicate 20.82916383815905
Replicate 31.5379295368973


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_260131.p1 GENE.S_Transcript_260131~~S_Transcript_260131.p1 ORF type:5prime_partial len:82 (-),score=6.19 S_Transcript_260131:111-356(-)
GTTTCCATCCAAGAGCAGGGCACCAGTCTTGAACCAAACAGCTTCAGGGCCACAGTTAGCACCGAATTTGTTGAAAGCCTCTGGGATGATGAACCCAGCTGCTCCAAGCATAGCCCACCGGGCGTGGATCAGCTCATATGCACGATACTTGGCCAAGTTCTCTGGCTTCTTGCTCAGACCAAAAGGATCATAACCGTAGCTGCAACAAAACATAATTTGTCAATACTTGAATTGGTTTATTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_260131.p1 GENE.S_Transcript_260131~~S_Transcript_260131.p1 ORF type:5prime_partial len:82 (-),score=6.19 S_Transcript_260131:111-356(-)
VSIQEQGTSLEPNSFRATVSTEFVESLWDDEPSCSKHSPPGVDQLICTILGQVLWLLAQTKRIITVAATKHNLSILELVYF*

Click here to download the sequence:
Link to NCBI Protein BLAST